Advisor: Phillips, Rob, Thesis and Dissertations from CaltechTHESIS

• Hirokawa, Soichi 2023 (PHD) Dynamics of Protein-Mediated Polymer Coupling and their Implications in Antibody Production and Emergent Patterning 10.7907/fpmm-a552
• Banks, Rachel A. 2022 (PHD) Experimental and Theoretical Studies of Non-Equilibrium Systems: Motor-Microtubule Assemblies and the Human-Earth System 10.7907/5ee6-j454
• Beeler, Suzannah Michelle 2022 (PHD) Deciphering Regulation in Escherichia coli: From Genes to Genomes 10.7907/p3rg-m937
• Razo-Mejia, Manuel 2022 (PHD) Physical Biology of Cellular Information Processing 10.7907/kpc2-b345
• Galstyan, Vahe 2022 (PHD) Studies in Physical Biology: Exploring Allosteric Regulation, Enzymatic Error Correction, and Cytoskeletal Self-Organization Using Theory and Modeling 10.7907/1fzr-1240
• Morrison, Muir 2021 (PHD) Statistical Mechanics of Problems in Transcription Regulation 10.7907/d042-rp26
• Ireland, William Thornton 2020 (PHD) A Quantitative and High-Throughput Approach to Gene Regulation in Escherichia coli 10.7907/0sk3-hd69
• Chure, Griffin Daniel 2020 (PHD) The Molecular Biophysics of Evolutionary and Physiological Adaptation 10.7907/q8h6-xr92
• Einav, Tal 2019 (PHD) Taming the Molecular Dance: Harnessing Statistical Mechanics to Quantitatively Characterize Allosteric Systems 10.7907/S4CV-T162
• Barnes, Stephanie Loos 2018 (PHD) Decoding the Regulatory Genome: Quantitative Analysis of Transcriptional Regulation in Escherichia coli 10.7907/D13T-7868
• Belliveau, Nathan Maurice 2018 (PHD) Quantitative Dissection of the Allosteric and Sequence-Dependent Regulatory Genome in E. coli 10.7907/Z9DN438T
• Mahmoudabadi, Gita 2018 (PHD) Virology By The Numbers: A Quantitative Exploration of Viral Energetics, Genomics, and Ecology 10.7907/Z9Q81B91
• Chen, Yi-Ju 2015 (PHD) The Mechanical Genome in Regulation and Infection 10.7907/Z9PC308X
• Lovely, Geoffrey A. 2014 (PHD) Biophysics of V(D)J Recombination and Genome Packaging: In Singulo Studies on RAG, HMGB1, and TFAM 10.7907/Z9W9573H
• Jones, Daniel Lawson III 2014 (PHD) Sequence-Function Relationships in E. coli Transcriptional Regulation 10.7907/4J7V-WD59
• Rydenfelt, Mattias Sven Olof 2014 (PHD) The Combinatorics of Transcriptional Regulation 10.7907/PNX5-Y638
• Bialecka-Fornal, Maja I. 2013 (PHD) Single-Cell Analysis of the Physiology of Mechanosensation in Bacteria 10.7907/7SRD-WS94
• Johnson, Stephanie Lynn 2012 (PHD) DNA Mechanics and Transcriptional Regulation in the E. coli lac Operon 10.7907/W40T-PD39
• Van Valen, David Ashley 2011 (PHD) Case Studies in Quantitative Biology: Biochemistry on a Leash and a Single-Molecule Hershey-Chase Experiment 10.7907/FJW3-G615
• Tadmor, Arbel David 2011 (PHD) Phage-Host Interaction in Nature 10.7907/68Q5-D532
• Garcia, Hernan G. 2011 (PHD) Transcriptional Regulation by the Numbers 10.7907/63RG-8P84
• Wu, David Dah-wei 2010 (PHD) Biomechanical Information Transfer: Maximum Caliber, λ Genome Ejection Dynamics, and the Formation of Otoliths in Zebrafish 10.7907/X454-MV52
• Ursell, Tristan Scott 2009 (PHD) Stretching the Definition of a Lipid Bilayer: Elasticity’s Role in Protein and Lipid Organization 10.7907/Q0R5-K353
• Peterson, Eric Lee 2008 (PHD) A Random Walk in Physical Biology 10.7907/X00X-VC27
• Han, Lin 2008 (PHD) In vitro DNA Mechanics in Gene Regulation: One Molecule at a Time 10.7907/7573-A922
• Seitaridou, Effrosyni 2008 (PHD) Non-Equilibrium Dynamics: Diffusion in Small Numbers and Ribosomal Self-Assembly 10.7907/X12R-DA46
• Grayson, Paul Daniel 2007 (PHD) The DNA Ejection Process in Bacteriophage λ 10.7907/A7ED-4044
• Inamdar, Mandar Mukund 2006 (PHD) Dissipative Nanomechanics 10.7907/P5K9-BD68
• Wiggins, Paul Alexander 2005 (PHD) Biology Beyond Biochemistry:The Mechanics of Life 10.7907/015B-JA11