Osorio-Rodriguez, Daniela; Metcalfe, Kyle S.; et el. (2023) Microbially
induced precipitation of silica by anaerobic methane-oxidizing consortia
and implications for microbial fossil preservation ; Proceedings of
the National Academy of Sciences; Vol. 120; No. 51; e2302156120; 10.1073/pnas.2302156120
Osorio-Rodriguez, Daniela; Metcalfe, Kyle S.; et el. (2023) Microbially
induced precipitation of silica by anaerobic methane-oxidizing consortia
and implications for microbial fossil preservation ; Proceedings of
the National Academy of Sciences; Vol. 120; No. 51; e2302156120; 10.1073/pnas.230215612
Candry, Pieter; Chadwick, Grayson L.; et el. (2023) Trophic
interactions shape the spatial organization of medium-chain carboxylic
acid producing granular biofilm communities ; ISME Journal; 10.1038/s41396-023-01508-8
Murali, Ranjani; Yu, Hang; et el. (2023) Physiological
potential and evolutionary trajectories of syntrophic sulfate-reducing
bacterial partners of anaerobic methanotrophic archaea ; PLOS
Biology; Vol. 21; No. 9; e3002292; PMCID PMC10553843; 10.1371/journal.pbio.3002292
Mangenot, Xavier; Xie, Hao; et el. (2023) ²H-²H
clumping in molecular hydrogen method and preliminary results ;
Chemical Geology; Vol. 621; Art. No. 121278; 10.1016/j.chemgeo.2022.121278
Murali, Ranjani; Yu, Hang; et el. (2023) Physiological
adaptation of sulfate reducing bacteria in syntrophic partnership with
anaerobic methanotrophic archaea ; 10.1101/2022.11.23.517749
Laso-Pérez, Rafael; Wu, Fabai; et el. (2023) Evolutionary
diversification of methanotrophic ANME-1 archaea and their expansive
virome ; Nature Microbiology; Vol. 8; No. 2; 231-245; PMCID
PMC9894754; 10.1038/s41564-022-01297-4
Utter, D. R. and Orphan, V. J. (2023) Gifts
hidden in shadowy genome islands ; Cell; Vol. 186; No. 1; 5-7; 10.1016/j.cell.2022.12.001
McGlynn, Shawn Erin; Perkins, Guy; et el. (2022) A
Cristae-Like Microcompartment in Desulfobacterota ; mBio; Vol. 13;
No. 6; Art. No. 01613-22; PMCID PMC9764997; 10.1128/mbio.01613-22
Wegener, Gunter; Laso-Pérez, Rafael; et el. (2022) Anaerobic
Degradation of Alkanes by Marine Archaea ; Annual Review of
Microbiology; Vol. 76; No. 1; 553-577; 10.1146/annurev-micro-111021-045911
Aronson, Heidi S.; Monteverde, Danielle R.; et el. (2022) Sulfur
cycling at natural hydrocarbon and sulfur seeps in Santa Paula Creek,
CA ; Geobiology; Vol. 20; No. 5; 707-725; 10.1111/gbi.12512
Laso-Pérez, Rafael; Wu, Fabai; et el. (2022) Evolutionary
Diversification of Methanotrophic Ca. Methanophagales (ANME-1) and Their
Expansive Virome ; 10.1101/2022.07.04.498658
Schwartzman, Julia A.; Ebrahimi, Ali; et el. (2022) Bacterial
growth in multicellular aggregates leads to the emergence of complex
life cycles ; Current Biology; Vol. 32; No. 14; 3059-3069; PMCID
PMC9496226
Schwartzman, Julia A.; Ebrahimi, Ali; et el. (2022) Bacterial
growth in multicellular aggregates leads to the emergence of complex
life cycles ; Current Biology; Vol. 32; No. 14; 3059-3069; PMCID
PMC9496226; 10.1016/j.cub.2022.06.011
Schwartzman, Julia A.; Ebrahimi, Ali; et el. (2022) Bacterial
growth in multicellular aggregates leads to the emergence of complex
life cycles ; Current Biology; Vol. 32; No. 14; 3059-3069
Heryakusuma, Christian; Susanti, Dwi; et el. (2022) A
Reduced F₄₂₀-Dependent Nitrite Reductase in an Anaerobic Methanotrophic
Archaeon ; Journal of Bacteriology; Vol. 204; No. 7; Art.
No. e00078-22; PMCID PMC9295563; 10.1128/jb.00078-22
Speth, Daan R.; Yu, Feiqiao B.; et el. (2022) Microbial
communities of Auka hydrothermal sediments shed light on vent
biogeography and the evolutionary history of thermophily ; ISME
Journal; Vol. 16; 1750-1764; 10.1038/s41396-022-01222-x
Yu, Hang; Speth, Daan R.; et el. (2022) Community
Structure and Microbial Associations in Sediment-Free Methanotrophic
Enrichment Cultures from a Marine Methane Seep ; Applied and
Environmental Microbiology; Vol. 88; No. 11; Art. No. e0210921; PMCID
PMC9195934; 10.1128/aem.02109-21
Case, Nicola T.; Song, Min; et el. (2022) Exploring
Space via Astromycology: A Report on the CIFAR Programs Earth 4D and
Fungal Kingdom Inaugural Joint Meeting ; Astrobiology; Vol. 22;
No. 6; 637-640; PMCID PMC9233531; 10.1089/ast.2021.0186
Lingappa, Usha F.; Stein, Nathaniel T.; et el. (2022) Early
impacts of climate change on a coastal marine microbial mat
ecosystem ; Science Advances; Vol. 8; No. 21; Art. No. eabm7826;
PMCID PMC9140962; 10.1126/sciadv.abm7826
Himmler, Tobias; Crémière, Antoine; et el. (2022) Putative
fossils of chemotrophic microbes preserved in seep carbonates from
Vestnesa Ridge, off northwest Svalbard, Norway ; Geology; Vol. 50;
No. 2; 169-173; 10.1130/g49620.1
Wu, Fabai; Speth, Daan R.; et el. (2022) Unique
mobile elements and scalable gene flow at the prokaryote–eukaryote
boundary revealed by circularized Asgard archaea genomes ; Nature
Microbiology; Vol. 7; No. 2; 200-212; 10.1038/s41564-021-01039-y
Chadwick, Grayson L.; Skennerton, Connor T.; et el. (2022) Comparative
genomics reveals electron transfer and syntrophic mechanisms
differentiating methanotrophic and methanogenic archaea ; PLoS
Biology; Vol. 20; No. 1; Art. No. e3001508; PMCID PMC9012536; 10.1371/journal.pbio.3001508
Yu, Hang; Skennerton, Connor T.; et el. (2022) Sulfate
differentially stimulates but is not respired by diverse anaerobic
methanotrophic archaea ; ISME Journal; Vol. 16; No. 1; 168-177; 10.1038/s41396-021-01047-0
Lloyd, M. K.; Trembath-Reichert, E.; et el. (2021) Methoxyl
stable isotopic constraints on the origins and limits of coal-bed
methane ; Science; Vol. 374; No. 6569; 894-897; 10.1126/science.abg0241
Osorio‐Rodriguez, Daniela; Razo-Mejia, Manuel; et el. (2021) Sulfur
isotope fractionations constrain the biological cycling of
dimethylsulfoniopropionate in the upper ocean ; Limnology and
Oceanography; Vol. 66; No. 10; 3607-3618; 10.1002/lno.11901
Speth, Daan R.; Yu, Feiqiao B.; et el. (2021) Microbial
community of recently discovered Auka vent field sheds light on vent
biogeography and evolutionary history of thermophily ; 10.1101/2021.08.02.454472
Jiménez Otero, Fernanda; Chadwick, Grayson L.; et el. (2021) Evidence
of a Streamlined Extracellular Electron Transfer Pathway from Biofilm
Structure, Metabolic Stratification, and Long-Range Electron Transfer
Parameters ; Applied and Environmental Microbiology; Vol. 87; No. 17;
Art. No. AEM.00706-21; PMCID PMC8357294; 10.1128/aem.00706-21
Phillips, Alexandra A.; Speth, Daan R.; et el. (2021) Microbial
succession and dynamics in meromictic Mono Lake, California ;
Geobiology; Vol. 19; No. 4; 376-393; 10.1111/gbi.12437
Marlow, Jeffrey J.; Hoer, Daniel; et el. (2021) Carbonate-hosted
microbial communities are prolific and pervasive methane oxidizers at
geologically diverse marine methane seep sites ; Proceedings of the
National Academy of Sciences; Vol. 118; No. 25; Art. No. e2006857118;
PMCID PMC8237665; 10.1073/pnas.2006857118
He, Xiaojia; Chadwick, Grayson L.; et el. (2021) Controls
on Interspecies Electron Transport and Size Limitation of Anaerobically
Methane-Oxidizing Microbial Consortia ; mBio; Vol. 12; No. 3; Art.
No. e03620-20; 10.1128/mBio.03620-20
He, Xiaojia; Chadwick, Grayson; et el. (2021) Spatially
Resolved Electron Transport through Anode-Respiring Geobacter
sulfurreducens Biofilms: Controls and Constraints ; ChemElectroChem;
Vol. 8; No. 10; 1697; 10.1002/celc.202100425
He, Xiaojia; Chadwick, Grayson; et el. (2021) Spatially
Resolved Electron Transport through Anode‐Respiring Geobacter
sulfurreducens Biofilms: Controls and Constraints ; ChemElectroChem;
Vol. 8; No. 10; 1747-1758; 10.1002/celc.202100111
Ashford, Oliver S.; Guan, Shuzhe; et el. (2021) A
chemosynthetic ecotone—“chemotone”—in the sediments surrounding deep-sea
methane seeps ; Limnology and Oceanography; Vol. 66; No. 5;
1687-1702; 10.1002/lno.11713
Metcalfe, Kyle S.; Murali, Ranjani; et el. (2021) Experimentally-validated
correlation analysis reveals new anaerobic methane oxidation
partnerships with consortium-level heterogeneity in diazotrophy ;
ISME Journal; Vol. 15; No. 2; 377-396; PMCID PMC8027057; 10.1038/s41396-020-00757-1
Sim, Min Sub; Skennerton, Connor T.; et el. (2021) Physiological,
genomic, and sulfur isotopic characterization of methanol metabolism by
Desulfovibrio carbinolicus ; PLoS ONE; Vol. 16; No. 1; Art.
No. e0245069; 10.1371/journal.pone.0245069
Mullin, Sean W.; Wanger, Greg; et el. (2020) Patterns
of in situ Mineral Colonization by Microorganisms in a ~60°C Deep
Continental Subsurface Aquifer ; Frontiers in Microbiology; Vol. 11;
Art. No. 536535; PMCID PMC7711152; 10.3389/fmicb.2020.536535
Fincker, Maeva; Huber, Julie A.; et el. (2020) Metabolic
strategies of marine subseafloor Chloroflexi inferred from genome
reconstructions ; Environmental Microbiology; Vol. 22; No. 8;
3188-3204; 10.1111/1462-2920.15061
Houghton, J. L.; Jones, C.; et el. (2020) Resolving
micron-scale heterogeneity in porewater δ³⁴S_(H₂S) by combining films
for in-situ sulfide capture and secondary ion mass spectrometry ;
Marine Chemistry; Vol. 223; Art. No. 103810; 10.1016/j.marchem.2020.103810
Leu, Andy O.; McIlroy, Simon J.; et el. (2020) Lateral
Gene Transfer Drives Metabolic Flexibility in the Anaerobic
Methane-Oxidizing Archaeal Family Methanoperedenaceae ; mBio; Vol.
11; No. 3; Art. No. e01325-20; PMCID PMC7327174; 10.1128/mBio.01325-20
Goffredi, Shana K.; Tilic, Ekin; et el. (2020) Methanotrophic
bacterial symbionts fuel dense populations of deep-sea feather duster
worms (Sabellida, Annelida) and extend the spatial influence of methane
seepage ; Science Advances; Vol. 6; No. 14; Art. No. eaay8562; 10.1126/sciadv.aay8562
Leu, Andy O.; Cai, Chen; et el. (2020) Anaerobic
methane oxidation coupled to manganese reduction by members of the
Methanoperedenaceae ; ISME Journal; Vol. 14; No. 4; 1030-1041; PMCID
PMC7082337; 10.1038/s41396-020-0590-x
Bird, Laurence R.; Dawson, Katherine S.; et el. (2019) Carbon
isotopic heterogeneity of coenzyme F430 and membrane lipids in
methane‐oxidizing archaea ; Geobiology; Vol. 17; No. 6; 611-627; 10.1111/gbi.12354
Bublitz, DeAnna C.; Chadwick, Grayson L.; et el. (2019) Peptidoglycan
Production by an Insect-Bacterial Mosaic ; Cell; Vol. 179; No. 3;
703-712; PMCID PMC6838666; 10.1016/j.cell.2019.08.054
Chadwick, Grayson L.; Jiménez-Otero, Fernanda; et el. (2019) NanoSIMS
imaging reveals metabolic stratification within current-producing
biofilms ; Proceedings of the National Academy of Sciences of the
United States of America; Vol. 116; No. 41; 20716-20724; PMCID
PMC6789570; 10.1073/pnas.1912498116
Speth, Daan R. and Orphan, Victoria J. (2019) ASM-Clust:
classifying functionally diverse protein families using alignment score
matrices ; 10.1101/792739
Cavicchioli, Ricardo and Orphan, Victoria J. (2019) Scientists’
warning to humanity: microorganisms and climate change ; Nature
Reviews Microbiology; Vol. 17; No. 9; 569-586; PMCID PMC7136171; 10.1038/s41579-019-0222-5
Arrojo e Drigo, Rafael; Lev-Ram, Varda; et el. (2019) Age
Mosaicism across Multiple Scales in Adult Tissues ; Cell Metabolism;
Vol. 30; No. 2; 343-351; 10.1016/j.cmet.2019.05.010
Sapers, Haley M.; Razzell Hollis, Joseph; et el. (2019) The
Cell and the Sum of Its Parts: Patterns of Complexity in Biosignatures
as Revealed by Deep UV Raman Spectroscopy ; Frontiers in
Microbiology; Vol. 10; Art. No. 679; PMCID PMC6527968; 10.3389/fmicb.2019.00679
Boyd, Joel A.; Jungbluth, Sean P.; et el. (2019) Divergent
methyl-coenzyme M reductase genes in a deep-subseafloor
Archaeoglobi ; ISME Journal; Vol. 13; No. 5; 1269-1279; PMCID
PMC6474303; 10.1038/s41396-018-0343-2
Murali, Ranjani; Hemp, James; et el. (2019) FIND:
Identifying Functionally and Structurally Important Features in Protein
Sequences with Deep Neural Networks ; 10.1101/592808
Amend, Jan; Feyhl-Buska, Jayme; et el. (2019) Calorimetric
determination of microbial activity in low-energy environments
Sim, Min Sub; Sessions, Alex L.; et el. (2019) Precise
determination of equilibrium sulfur isotope effects during
volatilization and deprotonation of dissolved H_2S ; Geochimica et
Cosmochimica Acta; Vol. 248; 242-251; 10.1016/j.gca.2019.01.016
He, Xiaojia; Chadwick, Grayson; et el. (2019) Microbial
interactions in the anaerobic oxidation of methane: Model simulations
constrained by process rates and activity patterns ; Environmental
Microbiology; Vol. 21; No. 2; 631-647; 10.1111/1462-2920.14507
Stamenković, V.; Fischer, W. W.; et el. (2019) The
next frontier for planetary and human exploration ; Nature Astronomy;
Vol. 3; No. 2; 116-120; 10.1038/s41550-018-0676-9
Sim, Min Sub; Ogata, Hideaki; et el. (2019) Role
of APS reductase in biogeochemical sulfur isotope fractionation ;
Nature Communications; Vol. 10; Art. No. 44; PMCID PMC6327049; 10.1038/s41467-018-07878-4
Yu, Hang; Susanti, Dwi; et el. (2018) Comparative
Genomics and Proteomic Analysis of Assimilatory Sulfate Reduction
Pathways in Anaerobic Methanotrophic Archaea ; Frontiers in
Microbiology; Vol. 9; Art. No. 2917; PMCID PMC6286981; 10.3389/fmicb.2018.02917
Dekas, Anne E.; Fike, David A.; et el. (2018) Widespread
nitrogen fixation in sediments from diverse deep-sea sites of elevated
carbon loading ; Environmental Microbiology; Vol. 20; No. 12;
4281-4296; 10.1111/1462-2920.14342
Chadwick, Grayson L.; Hemp, James; et el. (2018) Convergent
evolution of unusual complex I homologs with increased proton pumping
capacity: energetic and ecological implications ; ISME Journal; Vol.
12; No. 11; 2668-2680; PMCID PMC6194058; 10.1038/s41396-018-0210-1
Yung, Yuk L.; Chen, Pin; et el. (2018) Methane
on Mars and Habitability: Challenges and Responses ; Astrobiology;
Vol. 18; No. 10; 1221-1242; PMCID PMC6205098; 10.1089/ast.2018.1917
Michel, Alice J.; Ward, Lewis M.; et el. (2018) The
gut of the finch: uniqueness of the gut microbiome of the Galápagos
vampire finch ; Microbiome; Vol. 6; Art. No. 167; PMCID PMC6146768;
10.1186/s40168-018-0555-8
Speth, Daan R. and Orphan, Victoria J. (2018) Metabolic
marker gene mining provides insight in global mcrA diversity and,
coupled with targeted genome reconstruction, sheds further light on
metabolic potential of the Methanomassiliicoccales ; PeerJ; Vol.
2018; No. 6; Art. No. e5614; PMCID PMC6147122; 10.7717/peerj.5614
Ijiri, Akira; Case, David H.; et el. (2018) Deep-biosphere
methane production stimulated by geofluids in the Nankai accretionary
complex ; Science Advances; Vol. 4; No. 6; Art. No. eaao4631; PMCID
PMC6007163; 10.1126/sciadv.aao4631
McGlynn, Shawn E.; Chadwick, Grayson L.; et el. (2018) Subgroup
characteristics of marine methane-oxidizing ANME-2 archaea and their
syntrophic partners revealed by integrated multimodal analytical
microscopy ; Applied and Environmental Microbiology; Vol. 84; No. 11;
Art. No. e00399-18; PMCID PMC5960974; 10.1128/AEM.00399-18
Zhu, Ying; Zhao, Rui; et el. (2018) Subnanogram
proteomics: impact of LC column selection, MS instrumentation and data
analysis strategy on proteome coverage for trace samples ;
International Journal of Mass Spectrometry; Vol. 427; 4-10; PMCID
PMC5863755; 10.1016/j.ijms.2017.08.016
Pasulka, Alexis L.; Thamatrakoln, Kimberlee; et el. (2018) Interrogating
marine virus-host interactions and elemental transfer with BONCAT and
nanoSIMS-based methods ; Environmental Microbiology; Vol. 20; No. 2;
671-692; 10.1111/1462-2920.13996
Yung, Yuk L.; Chen, Pin; et el. (2018) Methane
on Mars and Habitability: Challenges and Responses ; 10.7907/Z990220K
Fike, D. A.; Houghton, J. L.; et el. (2017) Spatially
resolved capture of hydrogen sulfide from the water column and
sedimentary pore waters for abundance and stable isotopic analysis ;
Marine Chemistry; Vol. 197; 26-37; 10.1016/j.marchem.2017.10.004
Case, David H.; Ijiri, Akira; et el. (2017) Aerobic
and Anaerobic Methanotrophic Communities Associated with Methane
Hydrates Exposed on the Seafloor: A High-Pressure Sampling and Stable
Isotope-Incubation Experiment ; Frontiers in Microbiology; Vol. 8;
Art. No. 2569; PMCID PMC5742206; 10.3389/fmicb.2017.02569
Trembath-Reichert, Elizabeth; Morono, Yuki; et el. (2017) Methyl-compound
use and slow growth characterize microbial life in 2-km-deep subseafloor
coal and shale beds ; Proceedings of the National Academy of Sciences
of the United States of America; Vol. 114; No. 44; E9206-E9215; PMCID
PMC5676895; 10.1073/pnas.1707525114
Terrado, Ramon; Pasulka, Alexis L.; et el. (2017) Autotrophic
and heterotrophic acquisition of carbon and nitrogen by a mixotrophic
chrysophyte established through stable isotope analysis ; ISME
Journal; Vol. 11; No. 9; 2022-2034; PMCID PMC5563956; 10.1038/ismej.2017.68
Skennerton, Connor T.; Chourey, Karuna; et el. (2017) Methane-Fueled
Syntrophy through Extracellular Electron Transfer: Uncovering the
Genomic Traits Conserved within Diverse Bacterial Partners of Anaerobic
Methanotrophic Archaea ; mBio; Vol. 8; No. 4; Art. No. e00530-17;
PMCID PMC5539420; 10.1128/mBio.00530-17
Marlow, Jeffrey J.; Steele, Joshua A.; et el. (2017) Monodeuterated
Methane, an Isotopic Tool To Assess Biological Methane Metabolism
Rates ; mSphere; Vol. 2; No. 4; Art. No. e00309; PMCID PMC5566838; 10.1128/mSphereDirect.00309-17
Sim, Min Sub; Paris, Guillaume; et el. (2017) Quantification
and isotopic analysis of intracellular sulfur metabolites in the
dissimilatory sulfate reduction pathway ; Geochimica et Cosmochimica
Acta; Vol. 206; 57-72; 10.1016/j.gca.2017.02.024
Glass, Jennifer B.; Chen, Si; et el. (2017) Trace
Metal Imaging of Sulfate-Reducing Bacteria and Methanogenic Archaea at
Single-Cell Resolution by Synchrotron X-Ray Fluorescence Imaging ;
Geomicrobiology Journal; Vol. 35; No. 1; 81-89; 10.1080/01490451.2017.1321068
Smith, Derek A.; Sessions, Alex L.; et el. (2017) Rapid
Quantification and Isotopic Analysis of Dissolved Sulfur Species ;
Rapid Communications in Mass Spectrometry; Vol. 31; No. 9; 791-803; 10.1002/rcm.7846
Tavormina, Patricia L.; Kellermann, Matthias Y.; et el. (2017) Starvation
and recovery in the deep-sea methanotroph Methyloprofundus
sedimenti ; Molecular Microbiology; Vol. 103; No. 2; 242-252; 10.1111/mmi.13553
Skennerton, Connor T.; Haroon, Mohamed F.; et el. (2016) Phylogenomic
analysis of Candidatus ‘Izimaplasma’ species: free-living
representatives from a Tenericutes clade found in methane seeps ;
ISME Journal; Vol. 10; No. 11; 2679-2692; PMCID PMC5113845; 10.1038/ismej.2016.55
Magyar, Paul M.; Orphan, Victoria J.; et el. (2016) Measurement
of rare isotopologues of nitrous oxide by high-resolution
multi-collector mass spectrometry ; Rapid Communications in Mass
Spectrometry; Vol. 30; No. 17; 1923-1940; 10.1002/rcm.7671
Pasulka, Alexis L.; Levin, Lisa A.; et el. (2016) Microbial
eukaryotic distributions and diversity patterns in a deep-sea methane
seep ecosystem ; Environmental Microbiology; Vol. 18; No. 9;
3022-3043; 10.1111/1462-2920.13185
Miranda, Priscilla J.; McLain, Nathan K.; et el. (2016) Characterization
of Chemosynthetic Microbial Mats Associated with Intertidal Hydrothermal
Sulfur Vents in White Point, San Pedro, CA, USA ; Frontiers in
Microbiology; Vol. 7; Art. No. 1163; PMCID PMC4961709; 10.3389/fmicb.2016.01163
Fradet, Danielle T.; Tavormina, Patricia L.; et el. (2016) Members
of the methanotrophic genus Methylomarinum inhabit inland mud pots ;
PeerJ; Vol. 4; Art. No. e2116; PMCID PMC4950536; 10.7717/peerj.2116
Hatzenpichler, Roland; Connon, Stephanie A.; et el. (2016) Visualizing
in situ translational activity for identifying and sorting slow-growing
archaeal−bacterial consortia ; Proceedings of the National Academy of
Sciences of the United States of America; Vol. 113; No. 28; E4069-E4078;
PMCID PMC4948357; 10.1073/pnas.1603757113
Dawson, Katherine S.; Scheller, Silvan; et el. (2016) Stable
Isotope Phenotyping via Cluster Analysis of NanoSIMS Data As a Method
for Characterizing Distinct Microbial Ecophysiologies and Sulfur-Cycling
in the Environment ; Frontiers in Microbiology; Vol. 7; Art. No. 774;
PMCID PMC4881376; 10.3389/fmicb.2016.00774
Marlow, Jeffrey J.; Skennerton, Connor T.; et el. (2016) Proteomic
Stable Isotope Probing Reveals Biosynthesis Dynamics of Slow Growing
Methane Based Microbial Communities ; Frontiers in Microbiology; Vol.
7; Art. No. 563; PMCID PMC4850331; 10.3389/fmicb.2016.00563
Trembath-Reichert, Elizabeth; Case, David H.; et el. (2016) Characterization
of microbial associations with methanotrophic archaea and
sulfate-reducing bacteria through statistical comparison of nested
Magneto-FISH enrichments ; PeerJ; Vol. 4; Art. No. e1913; PMCID
PMC4841229; 10.7717/peerj.1913
Dekas, Anne E.; Connon, Stephanie A.; et el. (2016) Activity
and interactions of methane seep microorganisms assessed by parallel
transcription and FISH-NanoSIMS analyses ; ISME Journal; Vol. 10;
No. 3; 678-692; PMCID PMC4817681; 10.1038/ismej.2015.145
Scheller, Silvan; Yu, Hang; et el. (2016) Artificial
electron acceptors decouple archaeal methane oxidation from sulfate
reduction ; Science; Vol. 351; No. 6274; 703-707; 10.1126/science.aad7154
Kopf, Sebastian H.; Sessions, Alex L.; et el. (2016) Trace
incorporation of heavy water reveals slow and heterogeneous pathogen
growth rates in cystic fibrosis sputum ; Proceedings of the National
Academy of Sciences of the United States of America; Vol. 113; No. 2;
E110-E116; PMCID PMC4720290; 10.1073/pnas.1512057112
Skennerton, Connor T.; Ward, Lewis M.; et el. (2015) Genomic
Reconstruction of an Uncultured Hydrothermal Vent Gammaproteobacterial
Methanotroph (Family Methylothermaceae) Indicates Multiple Adaptations
to Oxygen Limitation ; Frontiers in Microbiology; Vol. 6; Art.
No. 1425; PMCID PMC4688376; 10.3389/fmicb.2015.01425
Case, David H.; Pasulka, Alexis L.; et el. (2015) Methane
Seep Carbonates Host Distinct, Diverse, and Dynamic Microbial
Assemblages ; mBio; Vol. 6; No. 6; Art. No. e01348-15; PMCID
PMC4701829; 10.1128/mBio.01348-15
Alivisatos, A. P.; Blaser, M. J.; et el. (2015) A
unified initiative to harness Earth’s microbiomes ; Science; Vol.
350; No. 6260; 507-508; 10.1126/science.aac8480
Evans, Paul N.; Parks, Donovan H.; et el. (2015) Methane
metabolism in the archaeal phylum Bathyarchaeota revealed by
genome-centric metagenomics ; Science; Vol. 350; No. 6259; 434-438;
10.1126/science.aac7745
McGlynn, Shawn E.; Chadwick, Grayson L.; et el. (2015) Single
cell activity reveals direct electron transfer in methanotrophic
consortia ; Nature; Vol. 526; No. 7574; 531-535; 10.1038/nature15512
Bryson, Samuel Joseph; Thurber, Andrew R.; et el. (2015) A
novel sister clade to the enterobacteria microviruses (family
Microviridae) identified in methane seep sediments ; Environmental
Microbiology; Vol. 17; No. 10; 3708-3721; 10.1111/1462-2920.12758
Mason, Olivia U.; Case, David H.; et el. (2015) Comparison
of Archaeal and Bacterial Diversity in Methane Seep Carbonate Nodules
and Host Sediments, Eel River Basin and Hydrate Ridge, USA ;
Microbial Ecology; Vol. 70; No. 3; 766-784; 10.1007/s00248-015-0615-6
Dawson, K. S.; Osburn, M. R.; et el. (2015) Metabolic
associations with archaea drive shifts in hydrogen isotope fractionation
in sulfate-reducing bacterial lipids in cocultures and methane
seeps ; Geobiology; Vol. 13; No. 5; 462-477; 10.1111/gbi.12140
Marlow, J.; Peckmann, J.; et el. (2015) Autoendoliths:
a distinct type of rock-hosted microbial life ; Geobiology; Vol. 13;
No. 4; 303-307; 10.1111/gbi.12131
Kopf, Sebastian H.; McGlynn, Shawn E.; et el. (2015) Heavy
water and ¹⁵N labeling with NanoSIMS analysis reveals growth-rate
dependent metabolic heterogeneity in chemostats ; Environmental
Microbiology; Vol. 17; No. 7; 2542-2556; PMCID PMC4587896; 10.1111/1462-2920.12752
Hatzenpichler, Roland and Orphan, Victoria J. (2015) Detection
of Protein-Synthesizing Microorganisms in the Environment via
Bioorthogonal Noncanonical Amino Acid Tagging (BONCAT) ; ISBN
978-3-662-49129-4; Hydrocarbon and Lipid Microbiology Protocols:
Single-Cell and Single-Molecule Methods; Springer: Berlin; 145-157; 10.1007/8623_2015_61
Tavormina, Patricia L.; Hatzenpichler, Roland; et el. (2015) Methyloprofundus
sedimenti gen. nov., sp. nov., an obligate methanotroph from ocean
sediment belonging to the ‘deep sea-1’ clade of marine
methanotrophs ; International Journal of Systematic and Evolutionary
Microbiology; Vol. 65; No. 1; 251-259; 10.1099/ijs.0.062927-0
Wilbanks, Elizabeth G.; Jaekel, Ulrike; et el. (2014) Microscale
sulfur cycling in the phototrophic pink berry consortia of the
Sippewissett Salt Marsh ; Environmental Microbiology; Vol. 16;
No. 11; 3398-3415; PMCID PMC4262008; 10.1111/1462-2920.12388
Houghton, J.; Fike, D.; et el. (2014) Spatial
variability in photosynthetic and heterotrophic activity drives
localized δ^(13)C_(org) fluctuations and carbonate precipitation in
hypersaline microbial mats ; Geobiology; Vol. 12; No. 6; 557-574; 10.1111/gbi.12113
Sivan, Orit; Antler, Gilad; et el. (2014) Iron
oxides stimulate sulfate-driven anaerobic methane oxidation in
seeps ; Proceedings of the National Academy of Sciences of the United
States of America; Vol. 111; No. 40; E4139-E4147; PMCID PMC4209987; 10.1073/pnas.1412269111
Marlow, Jeffrey J.; Steele, Joshua A.; et el. (2014) Carbonate-hosted
methanotrophy represents an unrecognized methane sink in the deep
sea ; Nature Communications; Vol. 5; No. 10; Art. No. 6094; 10.1038/ncomms6094
Dekas, Anne E.; Chadwick, Grayson L.; et el. (2014) Spatial
distribution of nitrogen fixation in methane seep sediment and the role
of the ANME archaea ; Environmental Microbiology; Vol. 16; No. 10;
3012-3029; 10.1111/1462-2920.12247
Hatzenpichler, Roland; Scheller, Silvan; et el. (2014) In
situ visualization of newly synthesized proteins in environmental
microbes using amino acid tagging and click chemistry ; Environmental
Microbiology; Vol. 16; No. 8; 2568-2590; PMCID PMC4122687; 10.1111/1462-2920.12436
Glass, Jennifer B.; Yu, Hang; et el. (2014) Geochemical,
metagenomic and metaproteomic insights into trace metal utilization by
methane-oxidizing microbial consortia in sulphidic marine sediments ;
Environmental Microbiology; Vol. 16; No. 6; 1592-1633; 10.1111/1462-2920.12314
Crespo-Medina, M.; Meile, C. D.; et el. (2014) The
rise and fall of methanotrophy following a deepwater oil-well
blowout ; Nature Geoscience; Vol. 7; No. 6; 423-427; 10.1038/ngeo2156
Marlow, Jeffrey J.; LaRowe, Douglas E.; et el. (2014) The
Potential for Biologically Catalyzed Anaerobic Methane Oxidation on
Ancient Mars ; Astrobiology; Vol. 14; No. 4; 292-307; 10.1089/ast.2013.1078
Sapir, Amir; Dillman, Adler R.; et el. (2014) Microsporidia-nematode
associations in methane seeps reveal basal fungal parasitism in the deep
sea ; Frontiers in Microbiology; Vol. 5; Art. No. 43; PMCID
PMC3918590; 10.3389/fmicb.2014.00043
Green-Saxena, A.; Dekas, A. E.; et el. (2014) Nitrate-based
niche differentiation by distinct sulfate-reducing bacteria involved in
the anaerobic oxidation of methane ; ISME Journal; Vol. 8; No. 1;
150-163; PMCID PMC3869021; 10.1038/ismej.2013.147
Bailey, J. V.; Corsetti, F. A.; et el. (2013) Filamentous
sulfur bacteria preserved in modern and ancient phosphatic sediments:
implications for the role of oxygen and bacteria in phosphogenesis ;
Geobiology; Vol. 11; No. 5; 397-405; 10.1111/gbi.12046
Tocheva, Elitza I.; Dekas, Anne E.; et el. (2013) Polyphosphate
Storage during Sporulation in the Gram-Negative Bacterium Acetonema
longum ; Journal of Bacteriology; Vol. 195; No. 17; 3940-3946; PMCID
PMC3754598; 10.1128/JB.00712-13
Ussler, William, III; Preston, Christina; et el. (2013) Autonomous
Application of Quantitative PCR in the Deep Sea: In Situ Surveys of
Aerobic Methanotrophs Using the Deep-Sea Environmental Sample
Processor ; Environmental Science and Technology; Vol. 47; No. 16;
9339-9346; 10.1021/es4023199
Tavormina, Patricia L.; Ussler, William, III; et el. (2013) Abundance
and distribution of diverse membrane-bound monooxygenase (Cu-MMO) genes
within the Costa Rica oxygen minimum zone ; Environmental
Microbiology Reports; Vol. 5; No. 3; 414-423; 10.1111/1758-2229.12025
Yang, Song; Matsen, Janet B.; et el. (2013) Global
molecular analyses of methane metabolism in methanotrophic
Alphaproteobacterium, Methylosinus trichosporium OB3b. Part II.
metabolomics and 13C-labeling study ; Frontiers in Microbiology; Vol.
4; Art. No. 70; PMCID PMC3615224; 10.3389/fmicb.2013.00070
Druschel, Greg K.; Kafantaris, Fotios; et el. (2013) High
resolution profiling of sulfur and oxygen speciation in microbial mats:
Implications for coupling of hydrogen peroxide with sulfur
species
McGlynn, Shawn E.; Boyd, Eric S.; et el. (2013) Classifying
the metal dependence of uncharacterized nitrogenases ; Frontiers in
Microbiology; Vol. 3; Art. No. 419; PMCID PMC3578447; 10.3389/fmicb.2012.00419
Trembath-Reichert, Elizabeth; Green-Saxena, Abigail; et el. (2013)
Whole
Cell Immunomagnetic Enrichment of Environmental Microbial Consortia
Using rRNA-Targeted Magneto-FISH ; ISBN 9780124078635; Microbial
Metagenomics, Metatranscriptomics, and Metaproteomics; Academic Press;
21-44; 10.1016/B978-0-12-407863-5.00002-2
Green-Saxena, A.; Feyzullayev, A.; et el. (2012) Active
sulfur cycling by diverse mesophilic and thermophilic microorganisms in
terrestrial mud volcanoes of Azerbaijan ; Environmental Microbiology;
Vol. 14; No. 12; 3271-3286; 10.1111/1462-2920.12015
Magyar, Paul; Kopf, Sebastian; et el. (2012) Measurement
of nitrous oxide isotopologues and isotopomers by the MAT 253 Ultra ;
Mineralogical Magazine; Vol. 76; No. 6; 2054-2054
Polz, Martin; Orphan, Victoria; et el. (2012) Environmental
Microbiology: evolution of your premier journal ; Environmental
Microbiology; Vol. 14; No. 10; 2617-2619; 10.1111/j.1462-2920.2012.02869.x
Thurber, Andrew R.; Levin, Lisa A.; et el. (2012) Archaea
in metazoan diets: implications for food webs and biogeochemical
cycling ; ISME Journal; Vol. 6; No. 8; 1602-1612; PMCID PMC3400411;
10.1038/ismej.2012.16
Levin, Lisa A.; Orphan, Victoria J.; et el. (2012) A
hydrothermal seep on the Costa Rica margin: middle ground in a continuum
of reducing ecosystems ; Proceedings of the Royal Society of London.
Series B, Biological Sciences; Vol. 279; No. 1738; 2580-2588; PMCID
PMC3350710; 10.1098/rspb.2012.0205
Harrison, Benjamin K. and Orphan, Victoria J. (2012) Method
for Assessing Mineral Composition-Dependent Patterns in Microbial
Diversity Using Magnetic and Density Separation ; Geomicrobiology
Journal; Vol. 29; No. 5; 435-449; 10.1080/01490451.2011.581327
Glass, Jennifer B. and Orphan, Victoria J. (2012) Trace
metal requirements for microbial enzymes involved in the production and
consumption of methane and nitrous oxide ; Frontiers in Microbiology;
Vol. 3; Art. No. 61; PMCID PMC3282944; 10.3389/fmicb.2012.00061
Newman, Dianne K.; Orphan, Victoria J.; et el. (2012) Molecular
biology’s contributions to geobiology ; ISBN 9781118280812;
Fundamentals of Geobiology; Wiley-Blackwell: Hoboken, NJ; 228-249
Bailey, Jake V.; Salman, Verena; et el. (2011) Dimorphism
in methane seep-dwelling ecotypes of the largest known bacteria ;
ISME Journal; Vol. 5; No. 12; 1926-1935; PMCID PMC3223306; 10.1038/ismej.2011.66
House, Christopher H.; Beal, Emily J.; et el. (2011) The
Apparent Involvement of ANMEs in Mineral Dependent Methane Oxidation, as
an Analog for Possible Martian Methanotrophy ; Life; Vol. 1; No. 1;
19-33; PMCID PMC4187123; 10.3390/life1010019
Orphan, Victoria J. and Hoehler, Tori M. (2011) Microbiology:
Hydrogen for dinner ; Nature; Vol. 476; No. 7359; 154-155; 10.1038/476154a
Shapiro, Orr H.; Hatzenpichler, Roland; et el. (2011) Multicellular
photo-magnetotactic bacteria ; Environmental Microbiology Reports;
Vol. 3; No. 2; 233-238; 10.1111/j.1758-2229.2010.00215.x
Orphan, Victoria (2011) Fish-Sims:
Characterizing the Metabolic Potential and Interspecies Interactions
between Uncultured Environmental Microorganisms ; Biophysical
Journal; Vol. 100; No. 3, S1; 37a; 10.1016/j.bpj.2010.12.406
Tavormina, Patricia L.; Orphan, Victoria J.; et el. (2011) A
novel family of functional operons encoding methane/ammonia
monooxygenase-related proteins in gammaproteobacterial
methanotrophs ; Environmental Microbiology Reports; Vol. 3; No. 1;
91-100; 10.1111/j.1758-2229.2010.00192.x
Orphan, Victoria J. (2011) Getting
cozy: hidden microbial interactions in nature ; Environmental
Microbiology Reports; Vol. 3; No. 1; 16-18; 10.1111/j.1758-2229.2010.00236.x
Dekas, Anne E. and Orphan, Victoria J. (2011) Identification
of Diazotrophic Microorganisms in Marine Sediment via Fluorescence In
Situ Hybridization Coupled to Nanoscale Secondary Ion Mass Spectrometry
(FISH-NanoSIMS) ; ISBN 9780123812940; Research on Nitrification and
Related Processes; Elsevier: Amsterdam; 281-305; 10.1016/B978-0-12-381294-0.00012-2
Tavormina, Patricia L.; Ussler, William, III; et el. (2010) Distributions
of putative aerobic methanotrophs in diverse pelagic marine
environments ; ISME Journal; Vol. 4; No. 5; 700-710; 10.1038/ismej.2009.155
Goffredi, Shana K. and Orphan, Victoria J. (2010) Bacterial
community shifts in taxa and diversity in response to localized organic
loading in the deep sea ; Environmental Microbiology; Vol. 12; No. 2;
344-363; 10.1111/j.1462-2920.2009.02072.x
Bailey, Jake V.; Raub, Timothy D.; et el. (2010) Pseudofossils
in relict methane seep carbonates resemble endemic microbial
consortia ; Palaeogeography, Palaeoclimatology, Palaeoecology; Vol.
285; No. 1-2; 131-142; 10.1016/j.palaeo.2009.11.002
Bailey, Jake V.; Orphan, Victoria J.; et el. (2009) Chemotrophic
Microbial Mats and Their Potential for Preservation in the Rock
Record ; Astrobiology; Vol. 9; No. 9; 843-859; 10.1089/ast.2008.0314
Dekas, Anne E.; Poretsky, Rachel S.; et el. (2009) Deep-Sea
Archaea Fix and Share Nitrogen in Methane-Consuming Microbial
Consortia ; Science; Vol. 326; No. 5951; 422-426; 10.1126/science.1178223
Fike, David A.; Finke, Niko; et el. (2009) The
effect of sulfate concentration on (sub)millimeter-scale sulfide δ^(34)S
in hypersaline cyanobacterial mats over the diurnal cycle ;
Geochimica et Cosmochimica Acta; Vol. 73; No. 20; 6187-6204; 10.1016/j.gca.2009.07.006
House, Christopher H.; Orphan, Victoria J.; et el. (2009) Extensive
carbon isotopic heterogeneity among methane seep microbiota ;
Environmental Microbiology; Vol. 11; No. 9; 2207-2215; 10.1111/j.1462-2920.2009.01934.x
Beal, Emily J.; House, Christopher H.; et el. (2009) Manganese-
and iron-dependent marine methane oxidation ; Science; Vol. 325;
No. 5937; 184-187; 10.1126/science.1169984
Orphan, Victoria J.; Turk, Kendra A.; et el. (2009) Patterns
of ^(15)N assimilation and growth of methanotrophic ANME-2 archaea and
sulfate-reducing bacteria within structured syntrophic consortia
revealed by FISH-SIMS ; Environmental Microbiology; Vol. 11; No. 7;
1777-1791; 10.1111/j.1462-2920.2009.01903.x
Orphan, V. J. and House, C. H. (2009) Geobiological
investigations using secondary ion mass spectrometry: microanalysis of
extant and paleo-microbial processes ; Geobiology; Vol. 7; No. 3;
360-372; 10.1111/j.1472-4669.2009.00201.x
Fike, David A. and Orphan, Victoria J. (2009) High
resolution SIMS-based sulfide δ^(34)S: A new tool for characterizing
microbial activity in a variety of depositional environments ;
Geochimica et Cosmochimica Acta; Vol. 73; No. 13, S; A375; 10.1016/j.gca.2009.05.005
Orphan, Victoria J. (2009) Methods
for unveiling cryptic microbial partnerships in nature ; Current
Opinion in Microbiology; Vol. 12; No. 3; 231-237; 10.1016/j.mib.2009.04.003
Harrison, Benjamin K.; Zhang, Husen; et el. (2009) Variations
in archaeal and bacterial diversity associated with the sulfate-methane
transition zone in continental margin sediments (Santa Barbara Basin,
California) ; Applied and Environmental Microbiology; Vol. 75; No. 6;
1487-1499; PMCID PMC2655439; 10.1128/AEM.01812-08
Orphan, V. J.; Jahnke, L. L.; et el. (2008) Characterization
and spatial distribution of methanogens and methanogenic biosignatures
in hypersaline microbial mats of Baja California ; Geobiology; Vol.
6; No. 4; 376-393; 10.1111/j.1472-4669.2008.00166.x
Jahnke, L. L.; Orphan, V. J.; et el. (2008) Lipid
biomarker and phylogenetic analyses to reveal archaeal biodiversity and
distribution in hypersaline microbial mat and underlying sediment ;
Geobiology; Vol. 6; No. 4; 394-410; 10.1111/j.1472-4669.2008.00165.x
Fike, David A.; Gammon, Crystal L.; et el. (2008) Micron-scale
mapping of sulfur cycling across the oxycline of a cyanobacterial
mat ; Geochimica et Cosmochimica Acta; Vol. 72; No. 12; A268; 10.1016/j.gca.2008.05.009
Fike, David Andrew; Gammon, Crystal Lynn; et el. (2008) Micron-scale
mapping of sulfur cycling across the oxycline of a cyanobacterial mat: a
paired nanoSIMS and CARD-FISH approach ; ISME Journal; Vol. 2; No. 7;
749-759; 10.1038/ismej.2008.39
Tavormina, Patricia L.; Ussler, William, III; et el. (2008) Planktonic
and sediment-associated aerobic methanotrophs in two seep systems along
the North American margin ; Applied and Environmental Microbiology;
Vol. 74; No. 13; 3985-3995; PMCID PMC2446507; 10.1128/AEM.00069-08
Pernthaler, Annelie; Dekas, Anne E.; et el. (2008) Diverse
syntrophic partnerships from deep-sea methane vents revealed by direct
cell capture and metagenomics ; Proceedings of the National Academy
of Sciences of the United States of America; Vol. 105; No. 19;
7052-7057; PMCID PMC2383945; 10.1073/pnas.0711303105
Goffredi, Shana K.; Wilpiszeski, Regina; et el. (2008) Temporal
evolution of methane cycling and phylogenetic diversity of archaea in
sediments from a deep-sea whale-fall in Monterey Canyon, California ;
ISME Journal; Vol. 2; No. 2; 204-220; 10.1038/ismej.2007.103
Moran, James J.; Beal, Emily J.; et el. (2008) Methyl
sulfides as intermediates in the anaerobic oxidation of methane ;
Environmental Microbiology; Vol. 10; No. 1; 162-173; 10.1111/j.1462-2920.2007.01441.x
Orphan, Victoria J.; House, Christopher H.; et el. (2008) Archaea,
Methane, and Oases of the Deep ; Nova Acta Leopoldina; Vol. 96;
No. 356; 19-23
Fike, David; Ussler, William; et el. (2007) Micron-scale
resolution of sulfur cycling in a microbial mat ; Geochimica et
Cosmochimica Acta; Vol. 71; No. 15; A278; 10.1016/j.gca.2007.06.015
Orphan, Victoria J.; Pernthaler, Annelie; et el. (2007) The
ties that bind: Dynamics of syntrophic associations in marine methane
seeps ; Geochimica et Cosmochimica Acta; Vol. 71; No. 15, S; A743; 10.1016/j.gca.2007.06.023
Naehr, Thomas H.; Eichhubl, Peter; et el. (2007) Authigenic
carbonate formation at hydrocarbon seeps in continental margin
sediments: A comparative study ; Deep-Sea Research. Part II, Topical
Studies in Oceanography; Vol. 54; No. 11-13; 1268-1291; 10.1016/j.dsr2.2007.04.010
Treude, Tina; Orphan, Victoria J.; et el. (2007) Consumption
of Methane and CO_2 by Methanotrophic Microbial Mats from Gas Seeps of
the Anoxic Black Sea ; Applied and Environmental Microbiology; Vol.
73; No. 7; 2271-2283; PMCID PMC1855681; 10.1128/AEM.02685-06
House, Christopher H.; Biddle, Jennifer F.; et el. (2006) Linking
molecular taxonomy with environmental geochemsitry in environments
relevant to astrobiology: The anaerobic oxidation of methane in cold
seeps & deeply buried marine sediments ; Origins of life and
evolution of the biosphere; Vol. 36; No. 3; 314-315
Goffredi, Shana K.; Orphan, Victoria J.; et el. (2005) Evolutionary
innovation: a bone-eating marine symbiosis ; Environmental
Microbiology; Vol. 7; No. 9; 1369-1378; 10.1111/j.1462-2920.2005.00824.x
Orphan, V. J.; Ussler, W., III; et el. (2004) Geological,
geochemical, and microbiological heterogeneity of the seafloor around
methane vents in the Eel River Basin, offshore California ; Chemical
Geology; Vol. 205; No. 3-4; 265-289; 10.1016/j.chemgeo.2003.12.035
Goffredi, Shana K.; Warén, Anders; et el. (2004) Novel Forms
of Structural Integration between Microbes and a Hydrothermal Vent
Gastropod from the Indian Ocean ; Applied and Environmental
Microbiology; Vol. 70; No. 5; 3082-3090; PMCID PMC404406; 10.1128/AEM.70.5.3082-3090.2004
Girguis, Peter R.; Orphan, Victoria J.; et el. (2003) Growth and
Methane Oxidation Rates of Anaerobic Methanotrophic Archaea in a
Continuous-Flow Bioreactor ; Applied and Environmental Microbiology;
Vol. 69; No. 9; 5472-5482; PMCID PMC194967; 10.1128/AEM.69.9.5472-5482.2003
Orphan, V. J.; Goffredi, S. K.; et el. (2003) Geochemical
Influence on Diversity and Microbial Processes in High Temperature Oil
Reservoirs ; Geomicrobiology Journal; Vol. 20; No. 4; 295-311; 10.1080/01490450303898
Orphan, V. J.; House, C. H.; et el. (2002) Direct
phylogenetic and isotopic evidence for multiple groups of archaea
involved in the anaerobic oxidation of methane ; Geochimica et
Cosmochimica Acta; Vol. 66; No. S1; A571; 10.1016/S0016-7037(02)01016-5
Orphan, Victoria J.; House, Christopher H.; et el. (2002) Multiple
archaeal groups mediate methane oxidation in anoxic cold seep
sediments ; Proceedings of the National Academy of Sciences of the
United States of America; Vol. 99; No. 11; 7663-7668; PMCID PMC124316;
10.1073/pnas.072210299
Orphan, Victoria J.; House, Christopher H.; et el. (2001) Methane-Consuming
Archaea Revealed by Directly Coupled Isotopic and Phylogenetic
Analysis ; Science; Vol. 293; No. 5529; 484-487; 10.1126/science.1061338
Orphan, V. J.; Hinrichs, K.-U.; et el. (2001) Comparative
Analysis of Methane-Oxidizing Archaea and Sulfate-Reducing Bacteria in
Anoxic Marine Sediments ; Applied and Environmental Microbiology;
Vol. 67; No. 4; 1922-1934; PMCID PMC92814; 10.1128/AEM.67.4.1922-1934.2001
Hinrichs, Kai-Uwe; Summons, Roger E.; et el. (2000) Molecular
and isotopic analysis of anaerobic methane-oxidizing communities in
marine sediments ; Organic Geochemistry; Vol. 31; No. 12; 1685-1701;
10.1016/S0146-6380(00)00106-6
Orphan, V. J.; Taylor, L. T.; et el. (2000) Culture-Dependent
and Culture-Independent Characterization of Microbial Assemblages
Associated with High-Temperature Petroleum Reservoirs ; Applied and
Environmental Microbiology; Vol. 66; No. 2; 700-711; PMCID PMC91884; 10.1128/AEM.66.2.700-711.2000