Dervan, Peter
Dervan, Peter B. (2022) Skydiving into the interface of chemistry and biology ; Chemical & Engineering News; Vol. 100; No. 10; 36-40
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Kurmis, Alexis A. and Dervan, Peter B. (2019) Sequence specific suppression of androgen receptor–DNA binding in vivo by a Py-Im polyamide ; Nucleic Acids Research; Vol. 47; No. 8; 3828-3835; PMCID PMC6486638; 10.1093/nar/gkz153
Dervan, Peter B. (2019) A Personal Perspective on Chemical Biology: Before the Beginning ; Israel Journal of Chemistry; Vol. 59; No. 1-2; 71-83; 10.1002/ijch.201800171
Dervan, Peter B. (2019) Ronald Breslow Award for Achievement in Biomimetic Chemistry: David A. Tirrell ; Chemical and Engineering News; Vol. 97; No. 3; 51
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Dervan, Peter B. (2018) Herbert C. Brown Award for Creative Research in Synthetic Methods: Gregory C. Fu ; Chemical and Engineering News; Vol. 96; No. 2; 40
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Dervan, Peter B. (2016) Ahmed H. Zewail (1946-2016) ; Science; Vol. 353; No. 6304; 1103-1103; 10.1126/science.aai8466
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Kang, JeenJoo S. and Dervan, Peter B. (2015) A sequence-specific DNA binding small molecule triggers the release of immunogenic signals and phagocytosis in a model of B-cell lymphoma ; Quarterly Reviews of Biophysics; Vol. 48; No. 4; 453-464; PMCID PMC4743504; 10.1017/S0033583515000104
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Chenoweth, David M. and Dervan, Peter B. (2010) Structural Basis for Cyclic Py-Im Polyamide Allosteric Inhibition of Nuclear Receptor Binding ; Journal of the American Chemical Society; Vol. 132; No. 41; 14521-14529; PMCID PMC2954530; 10.1021/ja105068b
Jacobs, Claire S. and Dervan, Peter B. (2009) Modifications at the C-Terminus To Improve Pyrrole−Imidazole Polyamide Activity in Cell Culture ; Journal of Medicinal Chemistry; Vol. 52; No. 23; 7380-7388; PMCID PMC2788682; 10.1021/jm900256f
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Hsu, Carey F. and Dervan, Peter B. (2008) Quantitating the concentration of Py-Im polyamide–fluorescein conjugates in live cells ; Bioorganic and Medicinal Chemistry Letters; Vol. 18; No. 22; 5851-5855; PMCID PMC2587135; 10.1016/j.bmcl.2008.05.063
Hsu, Carey F. and Dervan, Peter B. (2008) Quantitating the Concentration of Polyamide-Fluorescein Conjugates in Live Cells ; Bioorganic Medicinal Chemistry Letters Online; Vol. 18; No. 22; 5851-5; 10.1016/j.bmcl.2008.05.063
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Baliga, Ramesh and Singleton, Jennifer W., el al. (1995) RecA•oligonucleotide filaments bind in the minor groove of double-stranded DNA ; Proceedings of the National Academy of Sciences of the United States of America; Vol. 92; No. 22; 10393-10397; PMCID PMC40803
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Colocci, Natalia and Dervan, Peter B. (1995) Cooperative Triple-Helix Formation at Adjacent DNA Sites: Sequence Composition Dependence at the Junction ; Journal of the American Chemical Society; Vol. 117; No. 17; 4781-4787; 10.1021/ja00122a007
Greenberg, William A. and Dervan, Peter B. (1995) Energetics of Formation of Sixteen Triple Helical Complexes Which Vary at a Single Position Within a Purine Motif ; Journal of the American Chemical Society; Vol. 117; No. 18; 5016-5022; 10.1021/ja00123a002
Priestley, E. Scott and Dervan, Peter B. (1995) Sequence Composition Effects on the Energetics of Triple Helix Formation by Oligonucleotides Containing a Designed Mimic of Protonated Cytosine ; Journal of the American Chemical Society; Vol. 117; No. 17; 4761-4765; 10.1021/ja00122a004
Hunziker, Jürg and Priestley, E. Scott, el al. (1995) Design of an N^7-Glycosylated Purine Nucleoside for Recognition of GC Base Pairs by Triple Helix Formation ; Journal of the American Chemical Society; Vol. 117; No. 9; 2661-2662; 10.1021/ja00114a036
Mrksich, Milan and Dervan, Peter B. (1995) Recognition in the Minor Groove of DNA at 5'-(A,T)GCGC(A,T)-3' by a Four Ring Tripeptide Dimer. Reversal of the Specificity of the Natural Product Distamycin ; Journal of the American Chemical Society; Vol. 117; No. 12; 3325-3332; 10.1021/ja00117a002
Best, George C. and Dervan, Peter B. (1995) Energetics of Formation of Sixteen Triple Helical Complexes Which Vary at a Single Position within a Pyrimidine Motif ; Journal of the American Chemical Society; Vol. 117; No. 4; 1187-1193; 10.1021/ja00109a001
Singleton, Scott F. and Dervan, Peter B. (1994) Temperature Dependence of the Energetics of Oligonucleotide-Directed Triple-Helix Formation at a Single DNA Site ; Journal of the American Chemical Society; Vol. 116; No. 23; 10376-10382; 10.1021/ja00102a003
Geierstanger, Bernhard H. and Mrksich, Milan, el al. (1994) Design of a G•C-Specific DNA Minor Groove-Binding Peptide ; Science; Vol. 266; No. 5185; 646-650; 10.1126/science.7939719
Khundkar, Lutfur R. and Perry, Joseph W., el al. (1994) Weak Temperature Dependence of Electron Transfer Rates in Fixed-Distance Porphyrin-Quinone Model Systems ; Journal of the American Chemical Society; Vol. 116; No. 21; 9700-9709; 10.1021/ja00100a040
Mrksich, Milan and Parks, Michell E., el al. (1994) Hairpin Peptide Motif. A New Class of Oligopeptides for Sequence-Specific Recognition in the Minor Groove of Double-Helical DNA ; Journal of the American Chemical Society; Vol. 116; No. 18; 7983-7988; 10.1021/ja00097a004
Han, Hogyu and Schepartz, Alanna, el al. (1994) Mapping RNA Regions in Eukaryotic Ribosomes That Are Accessible to Methidiumpropyl-EDTA•Fe(II) and EDTA•Fe(II) ; Biochemistry; Vol. 33; No. 33; 9831-9844
Han, Hogyu and Dervan, Peter B. (1994) Different conformational families of pyrimidine·purine·pyrimidine triple helices depending on backbone composition ; Nucleic Acids Research; Vol. 22; No. 14; 2837-2844; PMCID PMC308255; 10.1093/nar/22.14.2837
Staubli, Andrea B. and Dervan, Peter B. (1994) Sequence specificity of the non-natural pyrido[2,3-d]pyrimidine nucleoside in triple helix formation ; Nucleic Acids Research; Vol. 22; No. 13; 2637-2642; PMCID PMC308221; 10.1093/nar/22.13.2637
Han, Hogyu and Dervan, Peter B. (1994) Visualization of RNA tertiary struture by RNA-EDTA·Fe(II) autocleavage: Analysis of tRNAPhe with uridine-EDTA·Fe(II) at position 47 ; Proceedings of the National Academy of Sciences of the United States of America; Vol. 91; No. 11; 4955-4959; PMCID PMC43908
Hacia, Joseph G. and Dervan, Peter B., el al. (1994) Inhibition of Klenow fragment DNA polymerase on double-helical templates by oligonucleotide-directed triple-helix formation ; Biochemistry; Vol. 33; No. 20; 6192-6200; 10.1021/bi00186a019
Hacia, Joseph G. and Wold, Barbara J., el al. (1994) Phosphorothioate oligonucleotide-directed triple helix formation ; Biochemistry; Vol. 33; No. 18; 5367-5369; 10.1021/bi00184a002
Oakley, Martha G. and Turnbull, Kenneth D., el al. (1994) Synthesis of a hybrid protein containing the iron-binding ligand of bleomycin and the DNA-binding domain of Hin ; Bioconjugate Chemistry; Vol. 5; No. 3; 242-247; 10.1021/bc00027a009
Mrksich, Milan and Dervan, Peter B. (1994) Design of a Covalent Peptide Heterodimer for Sequence-Specific Recognition in the Minor Groove of Double-Helical DNA ; Journal of the American Chemical Society; Vol. 116; No. 8; 3663-3664; 10.1021/ja00087a088
Geierstanger, Bernhard H. and Jacobsen, Jens Peter, el al. (1994) Structural and dynamic characterization of the heterodimeric and homodimeric complexes of distamycin and 1-methylimidazole-2-carboxamide-netropsin bound to the minor groove of DNA ; Biochemistry; Vol. 33; No. 10; 3055-3062; 10.1021/bi00176a039
Colocci, Natalia and Dervan, Peter B. (1994) Cooperative Binding of 8-mer Oligonucleotides Containing 5-(1-Propynyl)-2'-deoxyuridine to Adjacent DNA Sites by Triple-Helix Formation ; Journal of the American Chemical Society; Vol. 116; No. 2; 785-786; 10.1021/ja00081a056
Singleton, Scott F. and Dervan, Peter B. (1993) Equilibrium association constants for oligonucleotide-directed triple helix formation at single DNA sites: linkage to cation valence and concentration ; Biochemistry; Vol. 32; No. 48; 13171-13179; 10.1021/bi00211a028
Dwyer, Tammy J. and Geierstanger, Bernhard H., el al. (1993) Structural analysis of covalent peptide dimers, bis(pyridine-2-carboxamidonetropsin)(CH_2)_(3-6), in complex with 5'-TGACT-3' sites by two-dimensional NMR ; Journal of the American Chemical Society; Vol. 115; No. 22; 9900-9906; 10.1021/ja00075a005
Mrksich, Milan and Dervan, Peter B. (1993) Enhanced sequence specific recognition in the minor groove of DNA by covalent peptide dimers: bis(pyridine-2-carboxamidonetropsin)(CH_2)_(3-6) ; Journal of the American Chemical Society; Vol. 115; No. 22; 9892-9899; 10.1021/ja00075a004
Radhakrishnan, Ishwar and Patel, Dinshaw J., el al. (1993) NMR structural studies on a nonnatural deoxyribonucleoside which mediates recognition of GC base pairs in pyrimidine•purine•pyrimidine DNA triplexes ; Biochemistry; Vol. 32; No. 41; 11228-11234; 10.1021/bi00092a037
Koshlap, Karl M. and Gillespie, Paul, el al. (1993) Nonnatural deoxyribonucleoside D_3 incorporated in an intramolecular DNA triplex binds sequence-specifically by intercalation ; Journal of the American Chemical Society; Vol. 115; No. 17; 7908-7909; 10.1021/ja00070a059
Feng, Jin-An and Simon, Melvin, el al. (1993) Crystallization and preliminary X-ray analysis of the DNA binding domain of the Hin recombinase with its DNA binding site ; Journal of Molecular Biology; Vol. 232; No. 3; 982-986; 10.1006/jmbi.1993.1443
Tor, Yitzhak and Dervan, Peter B. (1993) Site-specific enzymic incorporation of an unnatural base, N^6-(6-aminohexyl)isoguanosine, into RNA ; Journal of the American Chemical Society; Vol. 115; No. 11; 4461-4467; 10.1021/ja00064a007
Colocci, Natalia and Distefano, Mark D., el al. (1993) Cooperative oligonucleotide-directed triple helix formation at adjacent DNA sites ; Journal of the American Chemical Society; Vol. 115; No. 11; 4468-4473; 10.1021/ja00064a008
Han, Hogyu and Dervan, Peter B. (1993) Sequence-specific recognition of double helical RNA and RNA·DNA by triple helix formation ; Proceedings of the National Academy of Sciences of the United States of America; Vol. 90; No. 9; 3806-3810; PMCID PMC46394; 10.1073/pnas.90.9.3806
Mrksich, Milan and Dervan, Peter B. (1993) Antiparallel side-by-side heterodimer for sequence-specific recognition in the minor groove of DNA by a distamycin/1-methylimidazole-2-carboxamide-netropsin pair ; Journal of the American Chemical Society; Vol. 115; No. 7; 2572-2576; 10.1021/ja00060a004
MacDonald, Marcy E. and Strobel, Scott A., el al. (1993) A novel gene containing a trinucleotide repeat that is expanded and unstable on Huntington's disease chromosomes ; Cell; Vol. 72; No. 6; 971-83; 10.1016/0092-8674(93)90585-E
Stilz, Hans Ulrich and Dervan, Peter B. (1993) Specific recognition of CG base pairs by 2-deoxynebularine within the purine•purine•pyrimidine triple-helix motif ; Biochemistry; Vol. 32; No. 9; 2177-85; 10.1021/bi00060a008
Distefano, Mark D. and Dervan, Peter B. (1993) Energetics of Cooperative Binding of Oligonucleotides with Discrete Dimerization Domains to DNA by Triple Helix Formation ; Proceedings of the National Academy of Sciences of the United States of America; Vol. 90; No. 4; 1179-1183; PMCID PMC45836; 10.1073/pnas.90.4.1179
Distefano, Mark D. and Dervan, Peter B. (1992) Ligand-promoted dimerization of oligonucleotides binding cooperatively to DNA ; Journal of the American Chemical Society; Vol. 114; No. 27; 11006-11007; 10.1021/ja00053a073
Oakley, Martha G. and Mrksich, Milan, el al. (1992) Evidence that a minor groove-binding peptide and a major groove-binding protein can simultaneously occupy a common site on DNA ; Biochemistry; Vol. 31; No. 45; 10969-10975; 10.1021/bi00160a005
Wade, Warren S. and Mrksich, Milan, el al. (1992) Design of peptides that bind in the minor groove of DNA at 5'-(A,T)G(A,T)C(A,T)-3' sequences by a dimeric side-by-side motif ; Journal of the American Chemical Society; Vol. 114; No. 23; 8783-8794; 10.1021/ja00049a006
Singleton, Scott F. and Dervan, Peter B. (1992) Influence of pH on the equilibrium association constants for oligodeoxyribonucleotide-directed triple helix formation at single DNA sites ; Biochemistry; Vol. 31; No. 45; 10995-11003; 10.1021/bi00160a008
Griffin, Linda C. and Kiessling, Laura L., el al. (1992) Recognition of all four base pairs of double-helical DNA by triple-helix formation: design of nonnatural deoxyribonucleosides for pyrimidine•purine base pair binding ; Journal of the American Chemical Society; Vol. 114; No. 21; 7976-7982; 10.1021/ja00047a003
Mack, David P. and Dervan, Peter B. (1992) Sequence-specific oxidative cleavage of DNA by a designed metalloprotein, nickel(II)•GGH(Hin139-190) ; Biochemistry; Vol. 31; No. 39; 9399-405; 10.1021/bi00154a011
Dervan, Peter B. (1992) Reagents for the site-specific cleavage of megabase DNA ; Nature; Vol. 359; No. 6390; 87-88; 10.1038/359087a0
Singleton, Scott F. and Dervan, Peter B. (1992) Thermodynamics of oligodeoxyribonucleotide-directed triple helix formation: an analysis using quantitative affinity cleavage titration ; Journal of the American Chemical Society; Vol. 114; No. 18; 6957-6965; 10.1021/ja00044a002
Mrksich, Milan and Wade, Warren S., el al. (1992) Antiparallel side-by-side dimeric motif for sequence-specific recognition in the minor groove of DNA by the designed peptide 1-methylimidazole-2 carboxamide netropsin ; Proceedings of the National Academy of Sciences of the United States of America; Vol. 89; No. 16; 7586-7590; PMCID PMC49755; 10.1073/pnas.89.16.7586
Povsic, Thomas J. and Strobel, Scott A., el al. (1992) Sequence-specific double-strand alkylation and cleavage of DNA mediated by triple-helix formation ; Journal of the American Chemical Society; Vol. 114; No. 15; 5934-5941; 10.1021/ja00041a005
Luebke, Kevin J. and Dervan, Peter B. (1992) Nonenymatic ligation of double-helical DNA by alternate-strand triple helix formation ; Nucleic Acids Research; Vol. 20; No. 12; 3005-3009; PMCID PMC312430; 10.1093/nar/20.12.3005
Beal, Peter A. and Dervan, Peter B. (1992) Recognition of double helical DNA by alternate strand triple helix formation ; Journal of the American Chemical Society; Vol. 114; No. 13; 4976-4982; 10.1021/ja00039a004
Beal, Peter A. and Dervan, Peter B. (1992) The influence of single base triplet changes on the stability of a Pur·Pur·Pyr triple helix determined by affinity cleaving ; Nucleic Acids Research; Vol. 20; No. 11; 2773-2776; PMCID PMC336921; 10.1093/nar/20.11.2773
Kiessling, Laura L. and Griffin, Linda C., el al. (1992) Flanking sequence effects within the pyrimidine triple-helix motif characterized by affinity cleaving ; Biochemistry; Vol. 31; No. 10; 2829-2834; 10.1021/bi00125a026
Koh, Jong Sung and Dervan, Peter B. (1992) Design of a nonnatural deoxyribonucleoside for recognition of GC base pairs by oligonucleotide-directed triple helix formation ; Journal of the American Chemical Society; Vol. 114; No. 4; 1470-1478; 10.1021/ja00030a050
Maher, L. James, III and Dervan, Peter B., el al. (1992) Analysis of promoter-specific repression by triple-helical DNA complexes in a eukaryotic cell-free transcription system ; Biochemistry; Vol. 31; No. 1; 70-81; 10.1021/bi00116a012
Strobel, Scott A. and Doucette-Stamm, Lynn A., el al. (1991) Site-specific cleavage of human chromosome 4 mediated by triple-helix formation ; Science; Vol. 254; No. 5038; 1639-1642; 10.1126/science.1836279
Shin, Jumi A. and Ebright, Richard H., el al. (1991) Orientation of the Lac repressor DNA binding domain in complex with the left lac operator half site characterized by affinity cleaving ; Nucleic Acids Research; Vol. 19; No. 19; 5233-5236; PMCID PMC328881; 10.1093/nar/19.19.5233
Horne, David A. and Dervan, Peter B. (1991) Effects of an abasic site on triple helix formation characterized by affinity cleaving ; Nucleic Acids Research; Vol. 19; No. 18; 4963-4965; PMCID PMC328797; 10.1093/nar/19.18.4963
Luebke, Kevin J. and Dervan, Peter B. (1991) Nonenzymic sequence-specific ligation of double-helical DNA ; Journal of the American Chemical Society; Vol. 113; No. 19; 7447-7448; 10.1021/ja00019a066
Distefano, Mark D. and Shin, Jumi A., el al. (1991) Cooperative binding of oligonucleotides to DNA by triple helix formation: dimerization via Watson-Crick hydrogen bonds ; Journal of the American Chemical Society; Vol. 113; No. 15; 5901-5902; 10.1021/ja00015a076
Beal, Peter A. and Dervan, Peter B. (1991) Second Structural Motif for Recognition of DNA by Oligonucleotide-Directed Triple-Helix Formation ; Science; Vol. 251; No. 4999; 1360-1363; 10.1126/science.2003222
Strobel, Scott A. and Dervan, Peter B. (1991) Single-site enzymatic cleavage of yeast genomic DNA mediated by triple helix formation ; Nature; Vol. 350; No. 6314; 172-174; 10.1038/350172a0
Povsic, Thomas J. and Dervan, Peter B. (1990) Sequence-specific alkylation of double-helical DNA by oligonucleotide-directed triple-helix formation ; Journal of the American Chemical Society; Vol. 112; No. 25; 9428-9430; 10.1021/ja00181a075
Plum, G. Eric and Park, Young-Whan, el al. (1990) Thermodynamic characterization of the stability and the melting behavior of a DNA triplex: A spectroscopic and calorimetric study ; Proceedings of the National Academy of Sciences of the United States of America; Vol. 87; No. 23; 9436-9440; PMCID PMC55180; 10.1073/pnas.87.23.9436
Häner, Robert and Dervan, Peter B. (1990) Single-strand DNA triple-helix formation ; Biochemistry; Vol. 29; No. 42; 9761-9765; 10.1021/bi00494a001
Graham, Kenneth S. and Dervan, Peter B. (1990) Structural motif of the DNA binding domain of γδ-resolvase characterized by affinity cleaving ; Journal of Biological Chemistry; Vol. 265; No. 27; 16534-16540
Maher, L. James, III and Dervan, Peter B., el al. (1990) Kinetic analysis of oligodeoxyribonucleotide-directed triple-helix formation on DNA ; Biochemistry; Vol. 29; No. 37; 8820-8826; 10.1021/bi00489a045
Sluka, James P. and Griffin, John H., el al. (1990) Reagents and methods for the solid-phase synthesis of protein-EDTA for use in affinity cleaving ; Journal of the American Chemical Society; Vol. 112; No. 17; 6369-6374; 10.1021/ja00173a027
Sluka, James P. and Horvath, Suzanna J., el al. (1990) Importance of minor-groove contacts for recognition of DNA by the binding domain of Hin recombinase ; Biochemistry; Vol. 29; No. 28; 6551-6561; 10.1021/bi00480a002
Mack, David P. and Sluka, James P., el al. (1990) Orientation of the putative recognition helix in the DNA-binding domain of Hin recombinase complexed with the hix site ; Biochemistry; Vol. 29; No. 28; 6561-6567; 10.1021/bi00480a003
Strobel, Scott A. and Dervan, Peter B. (1990) Site-Specific Cleavage of a Yeast Chromosome by Oligonucleotide-Directed Triple-Helix Formation ; Science; Vol. 249; No. 4964; 73-75; 10.1126/science.2195655
Mack, David P. and Dervan, Peter B. (1990) Nickel-mediated sequence-specific oxidative cleavage of DNA by a designed metalloprotein ; Journal of the American Chemical Society; Vol. 112; No. 11; 4604-4606; 10.1021/ja00167a102
Oakley, Martha G. and Dervan, Peter B. (1990) Structural motif of the GCN4 DNA binding domain characterized by affinity cleaving ; Science; Vol. 248; No. 4957; 847-850; 10.1126/science.2111578
Horne, David A. and Dervan, Peter B. (1990) Recognition of mixed-sequence duplex DNA by alternate-strand triple-helix formation ; Journal of the American Chemical Society; Vol. 112; No. 6; 2435-2437; 10.1021/ja00162a063
Luebke, Kevin J. and Dervan, Peter B. (1989) Nonenzymatic ligation of oligodeoxyribonucleotides on a duplex DNA template by triple-helix formation ; Journal of the American Chemical Society; Vol. 111; No. 23; 8733-8735; 10.1021/ja00205a033
Griffin, Linda C. and Dervan, Peter B. (1989) Recognition of Thymine Adenine Base Pairs by Guanine in a Pyrimidine Triple Helix Motif ; Science; Vol. 245; No. 4921; 967-971; 10.1126/science.2549639
Strobel, Scott A. and Dervan, Peter B. (1989) Cooperative site specific binding of oligonucleotides to duplex DNA ; Journal of the American Chemical Society; Vol. 111; No. 18; 7286-7287; 10.1021/ja00200a073
Maher, Louis J., III and Wold, Barbara, el al. (1989) Inhibition of DNA binding proteins by oligonucleotide-directed triple helix formation ; Science; Vol. 245; No. 4919; 725-730; 10.1126/science.2549631
Wang, Andrew H.-J. and Cottens, Sylvain, el al. (1989) Interactions between a symmetrical minor groove binding compound and DNA oligonucleotides: ^1H and ^(19)F NMR studies ; Journal of Biomolecular Structure and Dynamics; Vol. 7; No. 1; 101-117; 10.1080/07391102.1989.10507754
Martello, Pamela A. and Bruzik, James P., el al. (1989) Specific activation of open complex formation at an Escherichia coli promoter by oligo(N-methylpyrrolecarboxamide)s: effects of peptide length and identification of DNA target sites ; Biochemistry; Vol. 28; No. 10; 4455-61; 10.1021/bi00436a050
Povsic, Thomas J. and Dervan, Peter B. (1989) Triple helix formation by oligonucleotides on DNA extended to the physiological pH range ; Journal of the American Chemical Society; Vol. 111; No. 8; 3059-3061; 10.1021/ja00190a047
Baker, Brenda F. and Dervan, Peter B. (1989) Sequence-specific cleavage of DNA by N-bromoacetyldistamycin. Product and kinetic analyses ; Journal of the American Chemical Society; Vol. 111; No. 7; 2700-2712; 10.1021/ja00189a054
Strobel, Scott A. and Moser, Heinz E., el al. (1988) Double strand cleavage of genomic DNA at a single site by triple helix formation ; Journal of the American Chemical Society; Vol. 110; No. 23; 7927-7929; 10.1021/ja00231a082
Mack, David P. and Iverson, Brent L., el al. (1988) Design and chemical synthesis of a sequence-specific DNA-cleaving protein ; Journal of the American Chemical Society; Vol. 110; No. 22; 7572-7574; 10.1021/ja00230a067
Iverson, Brent L. and Dervan, Peter B. (1988) Nonenzymatic sequence-specific methyl transfer to single-stranded DNA ; Proceedings of the National Academy of Sciences of the United States of America; Vol. 85; No. 13; 4615-4619; PMCID PMC280485
Dervan, Peter B. (1988) John D. Roberts ; Aldrichimica Acta; Vol. 21; No. 3; 71-77
Youngquist, R. Scott and Dervan, Peter B. (1987) A synthetic peptide binds 16 base pairs of A,T double helical DNA ; Journal of the American Chemical Society; Vol. 109; No. 24; 7564-7566; 10.1021/ja00258a070
Sluka, James P. and Horvath, Suzanna J., el al. (1987) Synthesis of a sequence-specific DNA-cleaving peptide ; Science; Vol. 238; No. 4830; 1129-1132; 10.1126/science.3120311
Moser, Heinz E. and Dervan, Peter B. (1987) Sequence-specific cleavage of double helical DNA by triple helix formation ; Science; Vol. 238; No. 4827; 645-650; 10.1126/science.3118463
Griffin, John H. and Dervan, Peter B. (1987) Metalloregulation in the sequence specific binding of synthetic molecules to DNA ; Journal of the American Chemical Society; Vol. 109; No. 22; 6840-6842; 10.1021/ja00256a043
Iverson, Brent L. and Dervan, Peter B. (1987) Adenine specific DNA chemical sequencing reaction ; Nucleic Acids Research; Vol. 15; No. 19; 7823-7830; PMCID PMC306310; 10.1093/nar/15.19.7823
Joran, A. D. and Leland, B. A., el al. (1987) Effect of exothermicity on electron transfer rates in photosynthetic molecular models ; Nature; Vol. 327; No. 6122; 508-511; 10.1038/327508a0
Wade, Warren S. and Dervan, Peter B. (1987) Alteration of the sequence specificity of distamycin on DNA by replacement of an N-methylpyrrolecarboxamide with pyridine-2-carboxamide ; Journal of the American Chemical Society; Vol. 109; No. 5; 1574-1575; 10.1021/ja00239a050
Iverson, Brent L. and Dervan, Peter B. (1987) Nonenzymatic sequence-specific cleavage of single-stranded DNA to nucleotide resolution. DNA methyl thioether probes ; Journal of the American Chemical Society; Vol. 109; No. 4; 1241-1243; 10.1021/ja00238a041
Mendel, David and Dervan, Peter B. (1987) Hoogsteen base pairs proximal and distal to echinomycin binding sites on DNA ; Proceedings of the National Academy of Sciences of the United States of America; Vol. 84; No. 4; 910-914; PMCID PMC304329
Griffin, John H. and Dervan, Peter B. (1986) Sequence-specific recognition of right-handed double-helical DNA by (2S,3S)- and (2R,3R)-dihydroxybis(netropsin)succinamide ; Journal of the American Chemical Society; Vol. 108; No. 16; 5008-5009; 10.1021/ja00276a052
Dervan, Peter B. and Baker, Brenda F. (1986) Design of sequence-specific DNA cleaving molecules: Comparison of distamycin-EDTA • Fe(II) and N-bromoacetyldistamycin ; Annals of the New York Academy of Sciences; Vol. 471; 51-59; 10.1111/j.1749-6632.1986.tb48025.x
Dervan, Peter B. (1986) Design of Sequence-Specific DNA-Binding Molecules ; Science; Vol. 232; No. 4749; 464-471; 10.1126/science.2421408
Baker, Brenda F. and Dervan, Peter B. (1985) Sequence-specific cleavage of double-helical DNA. N-Bromoacetyldistamycin ; Journal of the American Chemical Society; Vol. 107; No. 26; 8266-8268; 10.1021/ja00312a079
Leland, B. A. and Joran, A. D., el al. (1985) Picosecond Fluorescence Studies on Intramolecular Photochemical Electron Transfer in Porphyrins Linked to Quinones at Two Different Fixed Distances ; Journal of Physical Chemistry; Vol. 89; No. 26; 5571-5573; 10.1021/j100272a002
Youngquist, R. Scott and Dervan, Peter B. (1985) Sequence-specific recognition of B DNA by bis(EDTA-distamycin)fumaramide ; Journal of the American Chemical Society; Vol. 107; No. 19; 5528-5529; 10.1021/ja00305a036
Berger, Carole L. and Cantor, Charles, el al. (1985) Comparison of synthetic psoralen derivatives and 8-MOP in the inhibition of lymphocyte proliferation ; Annals of the New York Academy of Sciences; Vol. 453; 80-90; 10.1111/j.1749-6632.1985.tb11800.x
Harshman, Keith D. and Dervan, Peter B. (1985) Molecular recognition of B-DNA by Hoechst 33258 ; Nucleic Acids Research; Vol. 13; No. 13; 4825-4835; PMCID PMC321829; 10.1093/nar/13.13.4825
Youngquist, R. Scott and Dervan, Peter B. (1985) Sequence-specific recognition of B-DNA by oligo(N-methylpyrrolecarboxamide)s ; Proceedings of the National Academy of Sciences of the United States of America; Vol. 82; No. 9; 2565-2569; PMCID PMC397604
Dreyer, Geoffrey B. and Dervan, Peter B. (1985) Sequence-specific cleavage of single-stranded DNA: Oligodeoxynucleotide-EDTA·Fe(II) ; Proceedings of the National Academy of Sciences of the United States of America; Vol. 82; No. 4; 968-972; PMCID PMC397174
Joran, Alvin D. and Leland, Burt A., el al. (1984) Models for photochemical electron transfer at fixed distances. Porphyrin-bicyclo[2.2.2]octane-quinone and porphyrin-bisbicyclo[2.2.2]octane-quinone ; Journal of the American Chemical Society; Vol. 106; No. 20; 6090-6092; 10.1021/ja00332a062
Van Dyke, Michael M. and Dervan, Peter B. (1984) Echinomycin Binding Sites on DNA ; Science; Vol. 225; No. 4667; 1122-1127; 10.1126/science.6089341
Hertzberg, Robert P. and Dervan, Peter B. (1984) Cleavage of DNA with methidiumpropyl-EDTA-iron(II): reaction conditions and product analyses ; Biochemistry; Vol. 23; No. 17; 3934-3945; 10.1021/bi00312a022
Sylwester, Alan P. and Dervan, Peter B. (1984) Low-temperature matrix isolation of the 1,1-diazene H_2NN. Electronic and infrared characterization ; Journal of the American Chemical Society; Vol. 106; No. 16; 4648-4650; 10.1021/ja00328a076
Schultz, Peter G. and Dervan, Peter B. (1984) Distamycin and penta-N-methylpyrrolecarboxamide binding sites on native DNA. A comparison of methidiumpropyl-EDTA-Fe(II) footprinting and DNA affinity cleaving ; Journal of Biomolecular Structure and Dynamics; Vol. 1; No. 5; 1133-1147; 10.1080/07391102.1984.10507508
Taylor, John S. and Schultz, Peter G., el al. (1984) DNA affinity cleaving : Sequence specific cleavage of DNA by Distamycin-EDTA • Fe(II) and EDTA-distamycin • Fe(II) ; Tetrahedron; Vol. 40; No. 3; 457-465; 10.1016/0040-4020(84)85050-4
Schultz, P. G. and Dervan, P. B. (1983) Sequence-specific double-strand cleavage of DNA by bis(EDTA-distamycin•Fe^(II)) and EDTA-bis(distamycin)•Fe^(II) ; Journal of the American Chemical Society; Vol. 105; No. 26; 7748-7750; 10.1021/ja00364a049
Schultz, Peter G. and Dervan, Peter B. (1983) Sequence-specific double-strand cleavage of DNA by penta-N-methylpyrrolecarboxamide-EDTA·Fe(II) ; Proceedings of the National Academy of Sciences of the United States of America; Vol. 80; No. 22; 6834-6837; PMCID PMC390080
Van Dyke, Michael W. and Dervan, Peter B. (1983) Methidiumpropyl-EDTA•Fe(II) and DNase I footprinting report different small molecule binding site sizes on DNA ; Nucleic Acids Research; Vol. 11; No. 16; 5555-5567; PMCID PMC326297; 10.1093/nar/11.16.5555
Cartwright, Iain L. and Hertzberg, Robert P., el al. (1983) Cleavage of chromatin with methidiumpropyl-EDTA·iron(II) ; Proceedings of the National Academy of Sciences of the United States of America; Vol. 80; No. 11; 3213-3217; PMCID PMC394010
Van Dyke, Michael W. and Dervan, Peter B. (1983) Chromomycin, mithramycin, and olivomycin binding sites on heterogeneous DNA. Footprinting with methidiumpropyl-EDTA•iron(II) ; Biochemistry; Vol. 22; No. 10; 2373-2377; 10.1021/bi00279a011
Duan, Daniel C. and Dervan, Peter B. (1983) Evidence for a stereospecific 1,2-elimination reaction in a 1,1-diazene. Synthesis and decomposition of [N-phenyl(threo- and erythro)-2-deuterio-1-methylpropyl)amino]nitrene ; Journal of Organic Chemistry; Vol. 48; No. 7; 970-976; 10.1021/jo00155a008
Van Dyke, M. W. and Dervan, P. B. (1983) Footprinting with MPE·Fe(II). Complementary-strand Analyses of Distamycin- and Actinomycin-binding Sites on Heterogeneous DNA ; Cold Spring Harbor Symposia on Quantitative Biology; Vol. 47; No. Pt 1; 347-353; 10.1101/SQB.1983.047.01.040
Van Dyke, M. W. and Dervan, P. B. (1983) Footprinting with MPE•Fe(II). Complementary-strand analyses of distamycin- and actinomycin-binding sites on heterogeneous DNA ; Cold Spring Harbor Symposia on Quantitative Biology; Vol. 47; 347-353; 10.1101/SQB.1983.047.01.040
Schultz, Peter G. and Dervan, Peter B. (1982) Photochemistry of 1,1-diazenes. Direct and sensitized photolyses of N-(2,2,5,5-tetramethylpyrrolidyl)nitrene, dl-N-(2,5-diethyl-2,5-dimethylpyrrolidyl)nitrene, and N-(2,2,6,6-tetramethylpiperidyl)nitrene ; Journal of the American Chemical Society; Vol. 104; No. 24; 6660-6668; 10.1021/ja00388a031
Schultz, Peter G. and Taylor, John S., el al. (1982) Design synthesis of a sequence-specific DNA cleaving molecule. (Distamycin-EDTA)iron(II) ; Journal of the American Chemical Society; Vol. 104; No. 24; 6861-6863; 10.1021/ja00388a101
McIntyre, Daniel K. and Dervan, Peter B. (1982) 1,1-Di-tert-butyldiazene ; Journal of the American Chemical Society; Vol. 104; No. 23; 6466-6468; 10.1021/ja00387a061
Van Dyke, Michael W. and Hertzberg, Robert P., el al. (1982) Map of distamycin, netropsin, and actinomycin binding sites on heterogeneous DNA: DNA cleavage-inhibition patterns with methidiumpropyl-EDTA·Fe(II) ; Proceedings of the National Academy of Sciences of the United States of America; Vol. 79; No. 18; 5470-5474; PMCID PMC346925
Mitchell, Mark A. and Dervan, Peter B. (1982) Interhelical DNA-DNA crosslinking. Bis(monoazidomethidium)octaoxahexacosanediamine: a probe of packaged nucleic acid ; Journal of the American Chemical Society; Vol. 104; No. 15; 4265-4266; 10.1021/ja00379a045
Hinsberg, William D., III and Schultz, Peter G., el al. (1982) Direct studies of 1,1-diazenes. Syntheses, infrared and electronic spectra, and kinetics of the thermal decomposition of N-(2,2,6,6-tetramethylpiperidyl)nitrene and N-(2,2,5,5-tetramethylpyrrolidyl)nitrene ; Journal of the American Chemical Society; Vol. 104; No. 3; 766-773; 10.1021/ja00367a020
Ikeda, Richard A. and Dervan, Peter B. (1982) Sequence-selective inhibition of restriction endonucleases by the polyintercalator bis(methidium)spermine ; Journal of the American Chemical Society; Vol. 104; No. 1; 296-297; 10.1021/ja00365a058
Hertzberg, Robert P. and Dervan, Peter B. (1982) Cleavage of double helical DNA by methidium-propyl-EDTA-iron(II) ; Journal of the American Chemical Society; Vol. 104; No. 1; 313-315; 10.1021/ja00365a069
Dervan, Peter B. and Squillacote, Michael E., el al. (1981) ^(15)N NMR Spectrum of a 1,1-Diazene. N-(2,2,6,6-Tetramethylpiperidyl)nitrene ; Journal of the American Chemical Society; Vol. 103; No. 5; 1120-1122; 10.1021/ja00395a021
Schultz, Peter G. and Dervan, Peter B. (1981) Photochemistry of a 1,1-diazene, N-(2,2,5,5-tetramethylpyrrolidinyl)nitrene ; Journal of the American Chemical Society; Vol. 103; No. 6; 1563-1564; 10.1021/ja00396a048
Dervan, Peter B. and Santilli, Donald S. (1980) Synthesis and thermal decomposition of cis-3,4,5,6-tetrahydropyridazine-3,4-d2. Relative rates of rotation, cleavage, and closure for tetramethylene ; Journal of the American Chemical Society; Vol. 102; No. 11; 3863-3870; 10.1021/ja00531a031
Schultz, Peter G. and Dervan, Peter B. (1980) Synthesis and direct spectroscopic observation of N-(2,2,5,5-tetramethylpyrrolidinyl)nitrene. Comparison of five- and six-membered cyclic 1,1-dialkyldiazenes ; Journal of the American Chemical Society; Vol. 102; No. 2; 878-880; 10.1021/ja00522a090
Hinsberg, William D., III and Dervan, Peter B. (1979) Kinetics of the thermal decomposition of a 1,1-dialkyldiazene, N-(2,2,6,6-tetramethylpiperidyl)nitrene ; Journal of the American Chemical Society; Vol. 101; No. 20; 6142-6144; 10.1021/ja00514a058
Becker, Michael McClellan and Dervan, Peter B. (1979) Molecular recognition of nucleic acid by small molecules. Binding affinity and structural specificity of bis(methidium)spermine ; Journal of the American Chemical Society; Vol. 101; No. 13; 3664-3666; 10.1021/ja00507a046
Santilli, Donald S. and Dervan, Peter B. (1979) Thermal decomposition of cis-tetrahydropyridazine-3,4-d_2. Relative rates of rotation, cleavage, and closure for tetramethylene ; Journal of the American Chemical Society; Vol. 101; No. 13; 3663-3664; 10.1021/ja00507a045
Dervan, Peter B. and Jones, Carol R. (1979) Syntheses and Decomposition of meso- and dl-2,3-Dimethylsuccinyl and cis- and trans-1,2-Hexahydrophthaloyl Peroxides ; Journal of Organic Chemistry; Vol. 44; No. 13; 2116-2123; 10.1021/jo01327a016
Dervan, Peter B. and Uyehara, Tadao (1979) Stereochemical tests of cyclic 1,1-dialkyldiazene fragmentation reactions. Thermal decomposition of N-(cis-(and trans-)2,3-(and 2,5-)dimethylpyrrolidine)nitrenes ; Journal of the American Chemical Society; Vol. 101; No. 8; 2076-2082; 10.1021/ja00502a023
Dervan, Peter B. and Uyehara, Tadao, el al. (1979) Experimental determination of the relative rates of rotation, cleavage, closure, and 1,5-hydrogen shift for 3-methyl-1,4-pentanediyl. Evidence for 1,4 biradicals as common intermediates from different precursors, 3,4-(and 3,6-)dimethyl-3,4,5,6-tetrahydropyridazines and 1,2-dimethylcyclobutanes ; Journal of the American Chemical Society; Vol. 101; No. 8; 2069-2075; 10.1021/ja00502a022
Dervan, Peter B. and Becker, Michael M. (1978) Molecular recognition of DNA by small molecules. Synthesis of bis(methidium)spermine, a DNA polyintercalating molecule ; Journal of the American Chemical Society; Vol. 100; No. 6; 1968-1970; 10.1021/ja00474a075
Hinsberg, William D., III and Dervan, Peter B. (1978) Synthesis and direct spectroscopic observation of a 1,1-dialkyldiazene. Infrared and electronic spectrum of N-(2,2,6,6-tetramethylpiperidyl)nitrene ; Journal of the American Chemical Society; Vol. 100; No. 5; 1608-1610; 10.1021/ja00473a051
Jones, Carol R. and Dervan, Peter B. (1977) Six-membered cyclic diacyl peroxide fragmentations. Thermal decomposition of meso- and dl-2,3-dimethylsuccinoyl peroxides ; Journal of the American Chemical Society; Vol. 99; No. 20; 6772-6774; 10.1021/ja00462a058
Shippey, Michael A. and Dervan, Peter B. (1977) Trimethylsilyl anions. Direct synthesis of trimethylsilylbenzenes ; Journal of Organic Chemistry; Vol. 42; No. 15; 2654-2655; 10.1021/jo00435a037
Berson, Jerome A. and Dervan, Peter B., el al. (1976) Formation and thermal rearrangements of some dimers of butadiene and piperylene. Tests of the validity of thermochemical-kinetic arguments for identification of common biradical intermediates ; Journal of the American Chemical Society; Vol. 98; No. 19; 5937-5968; 10.1021/ja00435a031
Dervan, Peter B. and Uyehara, Tadao (1976) A stereochemical test of similarly substituted tetramethylenediazene and cyclic azo decompositions in the gas phase at the same temperature ; Journal of the American Chemical Society; Vol. 98; No. 7; 2003-2005; 10.1021/ja00423a078
Dervan, Peter B. and Uyehara, Tadao (1976) Thermal decomposition of cis- and trans-3,4- and -3,6-dimethyl-3,4,5,6-tetrahydropyridazines. Evidence against the hot diradical postulate for azo decompositions ; Journal of the American Chemical Society; Vol. 98; No. 5; 1262-1264; 10.1021/ja00421a037
Dervan, Peter B. and Shippey, Michael A. (1976) Trimethylsilylpotassium. Deoxygenation of epoxides with inversion of stereochemistry ; Journal of the American Chemical Society; Vol. 98; No. 5; 1265-1267; 10.1021/ja00421a039
Dervan, Peter B. and Uyehara, Tadao (1976) 7-Azabicyclo[2.2.1]heptane N-Imide as an Intermediate in the Thermal Decomposition of N-Amino-7-Azabicyclo[2.2.1]heptane and the Corresponding Benzenesulphonamide ; Journal of the Chemical Society. Chemical Communications; Vol. 1976; No. 12; 469-470; 10.1039/C39760000469
Berson, Jerome A. and Dervan, Peter B. (1973) Rearrangement of trans-1,2-divinylcyclobutane and the energy surface of the dimers of butadiene ; Journal of the American Chemical Society; Vol. 95; No. 1; 267-269; 10.1021/ja00782a061
Berson, Jerome A. and Dervan, Peter B. (1973) Mechanistic analysis of the four pathways in the 1,3-sigmatropic rearrangements of trans-1,2-trans, trans- and trans-1,2-cis,trans-dipropenylcyclobutane ; Journal of the American Chemical Society; Vol. 95; No. 1; 269-270; 10.1021/ja00782a062
Berson, Jerome A. and Dervan, Peter B. (1972) Stereodistal Cope rearrangement of trans-1,2-dialkenylcyclobutanes ; Journal of the American Chemical Society; Vol. 94; No. 25; 8949-8950; 10.1021/ja00780a074
Berson, Jerome A. and Dervan, Peter B. (1972) Incremental substituent effects leading to steric blockade of the boat-like six-center Cope rearrangement of cis-1,2-dialkenylcyclobutanes ; Journal of the American Chemical Society; Vol. 94; No. 21; 7597-7598; 10.1021/ja00776a064
Berson, Jerome A. and Dervan, Peter B., el al. (1972) Stereospecific double rearrangement of trans-3,4-dimethyl-cis,trans-cycloocta-1,5-diene to cis-3,4-dimethyl-cis,cis-cycloocta-1,5-diene ; Journal of the American Chemical Society; Vol. 94; No. 21; 7598-7599; 10.1021/ja00776a065
Bennett, O. Francis and Bouchard, M. J., el al. (1972) Hydroxide displacement of the sulfone linkage in thioxanthen-9-one 10,10-dioxides to benzophenone-2'-hydroxy-2-sulfinic acids. Intramolecular cyclization to xanthones ; Journal of Organic Chemistry; Vol. 37; No. 9; 1356-1359; 10.1021/jo00974a015