<h1>Pachter, Lior</h1> <h2>Book Chapter from <a href="https://authors.library.caltech.edu">CaltechAUTHORS</a></h2> <ul> <li>Singer, Meromit and Pachter, Lior (2014) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20170303-140414225">Bayesian Networks in the Study of Genome-wide DNA Methylation</a>; ISBN 9780198709022; Probabilistic Graphical Models for Genetics, Genomics, and Postgenomics; 363-386; <a href="https://doi.org/10.1093/acprof:oso/9780198709022.003.0014">10.1093/acprof:oso/9780198709022.003.0014</a></li> <li>Mortimer, Stefanie A. and Trapnell, Cole, el al. (2012) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20170303-160835568">SHAPE-Seq: High-Throughput RNA Structure Analysis</a>; ISBN 9780470559277; Current Protocols in Chemical Biology; 275-297; <a href="https://doi.org/10.1002/9780470559277.ch120019">10.1002/9780470559277.ch120019</a></li> <li>Aviran, Sharon and Lucks, Julius B., el al. (2011) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20170306-092934189">RNA structure characterization from chemical mapping experiments</a>; ISBN 978-1-4577-1817-5; 49th Annual Allerton Conference on Communication, Control, and Computing; 1743-1750; <a href="https://doi.org/10.1109/Allerton.2011.6120379">10.1109/Allerton.2011.6120379</a></li> <li>Pachter, Lior (2007) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20170307-135106127">An introduction to reconstructing ancestral genomes</a>; ISBN 978-0-8218-3964-5; Modeling and Simulation of Biological Networks; 10-29; <a href="https://doi.org/10.48550/arXiv.0612046">10.48550/arXiv.0612046</a></li> <li>Morton, Jason and Pachter, Lior, el al. (2006) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20170307-095347077">Geometry of rank tests</a>; ISBN 9788086742144; Proceedings of the 3rd European Workshop on Probabilistic Graphical Models; Art. No.7; <a href="https://doi.org/10.48550/arXiv.0605173">10.48550/arXiv.0605173</a></li> <li>Snir, Sagi and Pachter, Lior (2006) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20170307-163715632">Phylogenetic Profiling of Insertions and Deletions in Vertebrate Genomes</a>; ISBN 978-3-540-33295-4; Research in Computational Molecular Biology; 265-280; <a href="https://doi.org/10.1007/11732990_23">10.1007/11732990_23</a></li> <li>Alexandersson, Marina and Bray, Nicolas, el al. (2005) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20170308-113640795">Pair hidden Markov models</a>; ISBN 9780470011539; Encyclopedia of Genetics, Genomics, Proteomics and Bioinformatics; Art. No. 4:4.2:17; <a href="https://doi.org/10.1002/047001153X.g402215">10.1002/047001153X.g402215</a></li> <li>Chatterji, Sourav and Pachter, Lior (2004) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20170308-141248581">Multiple organism gene finding by collapsed Gibbs sampling</a>; ISBN 1-58113-755-9; Proceedings of the eighth annual international conference on Computational molecular biology (RECOMB '04); 187-193; <a href="https://doi.org/10.1145/974614.974639">10.1145/974614.974639</a></li> <li>Pachter, Lior and Lam, Fumei, el al. (2002) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20170309-094423019">Picking alignments from (Steiner) trees</a>; ISBN 1-58113-498-3; Proceedings of the sixth annual international conference on Computational biology (RECOMB '02); 246-253; <a href="https://doi.org/10.1145/565196.565228">10.1145/565196.565228</a></li> <li>Pachter, L. S. and Pachter, M. (2001) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20170309-101645949">Optimal paths for avoiding a radiating source</a>; ISBN 9780780370616; Proceedings of the 40th IEEE Conference on Decision and Control : December 4-7, 2001 : Hyatt Regency Grand Cypress, Orlando, Florida, USA; 3581-3586; <a href="https://doi.org/10.1109/CDC.2001.980415">10.1109/CDC.2001.980415</a></li> <li>Pachter, Lior and Alexandersson, Marina, el al. (2001) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20170309-084730577">Applications of generalized pair hidden Markov models to alignment and gene finding problems</a>; ISBN 1-58113-353-7; Proceedings of the fifth annual international conference on Computational biology (RECOMB '01); 241-248; <a href="https://doi.org/10.1145/369133.369227">10.1145/369133.369227</a></li> <li>Batzoglou, Serafim and Pachter, Lior, el al. (2000) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20170309-111631818">Human and mouse gene structure: comparative analysis and application to exon prediction</a>; ISBN 1-58113-186-0; Proceedings of the fourth annual international conference on Computational molecular biology (RECOMB '00); 46-53; <a href="https://doi.org/10.1145/332306.332326">10.1145/332306.332326</a></li> <li>Pachter, Lior and Batzoglou, Serafim, el al. (1999) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20170309-113403506">A dictionary based approach for gene annotation</a>; ISBN 1-58113-069-4; Proceedings of the third annual international conference on Computational molecular biology (RECOMB '99); 285-294; <a href="https://doi.org/10.1145/299432.299504">10.1145/299432.299504</a></li> <li>Pachter, Lior and Snevily, Hunter S., el al. (1995) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20170309-150137723">On pebbling graphs</a></li> </ul>