@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/118321,
    title ="A Cristae-Like Microcompartment in Desulfobacterota",
    author = "McGlynn, Shawn Erin and Perkins, Guy and Sim, Min Sub and Mackey, Mason and Deerinck, Thomas J. and Thor, Andrea and Phan, Sebastien and Ballard, Daniel and Ellisman, Mark H. and Orphan, Victoria J.",
    journal = "mBio",
    volume = "13",
    number = "6",
    pages = "Art. No. 01613-22",
    month = "November",
    year = "2022",
    doi = "https://doi.org/10.1128/mbio.01613-22",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20221212-796746500.36",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/116897,
    title ="Anaerobic Degradation of Alkanes by Marine Archaea",
    author = "Wegener, Gunter and Laso-Pérez, Rafael and Orphan, Victoria J. and Boetius, Antje",
    journal = "Annual Review of Microbiology",
    volume = "76",
    number = "1",
    pages = "553-577",
    month = "September",
    year = "2022",
    doi = "https://doi.org/10.1146/annurev-micro-111021-045911",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20220912-80857800",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/115946,
    title ="Sulfur cycling at natural hydrocarbon and sulfur seeps in Santa Paula Creek, CA",
    author = "Aronson, Heidi S. and Monteverde, Danielle R. and Barnes, Ben Davis and Johnson, Brooke R. and Zawaski, Mike J. and Speth, Daan R. and Wang, Xingchen Tony and Wu, Fenfang and Webb, Samuel M. and Trower, Elizabeth J. and Magyar, John S. and Sessions, Alex L. and Orphan, Victoria J. and Fischer, Woodward W.",
    journal = "Geobiology",
    volume = "20",
    number = "5",
    pages = "707-725",
    month = "September",
    year = "2022",
    doi = "https://doi.org/10.1111/gbi.12512",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20220728-730554000",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/111725,
    title ="Bacterial growth in multicellular aggregates leads to the emergence of complex life cycles",
    author = "Schwartzman, Julia A. and Ebrahimi, Ali and Chadwick, Grayson and Sato, Yuya and Roller, Benjamin R. K. and Orphan, Victoria J. and Cordero, Otto X.",
    journal = "Current Biology",
    volume = "32",
    number = "14",
    pages = "3059-3069",
    month = "July",
    year = "2022",
    doi = "https://doi.org/10.1016/j.cub.2022.06.011",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20211103-160314501",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/116176,
    title ="Evolutionary Diversification of Methanotrophic Ca. Methanophagales (ANME-1) and Their Expansive Virome",
    author = "Laso-Pérez, Rafael and Wu, Fabai and Crémière, Antoine and Speth, Daan R. and Magyar, John S. and Krupovic, Mart and Orphan, Victoria J.",
    
    
    
    
    month = "July",
    year = "2022",
    
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20220808-886882000",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/115644,
    title ="A Reduced F₄₂₀-Dependent Nitrite Reductase in an Anaerobic Methanotrophic Archaeon",
    author = "Heryakusuma, Christian and Susanti, Dwi and Yu, Hang and Li, Zhou and Purwantini, Endang and Hettich, Robert L. and Orphan, Victoria J. and Mukhopadhyay, Biswarup",
    journal = "Journal of Bacteriology",
    volume = "204",
    number = "7",
    pages = "Art. No. e00078-22",
    month = "July",
    year = "2022",
    doi = "https://doi.org/10.1128/jb.00078-22",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20220715-744227000",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/114149,
    title ="Microbial communities of Auka hydrothermal sediments shed light on vent biogeography and the evolutionary history of thermophily",
    author = "Speth, Daan R. and Yu, Feiqiao B. and Connon, Stephanie A. and Lim, Sujung and Magyar, John S. and Peña-Salinas, Manet E. and Quake, Stephen R. and Orphan, Victoria J.",
    journal = "ISME Journal",
    volume = "16",
    
    pages = "1750-1764",
    month = "July",
    year = "2022",
    doi = "https://doi.org/10.1038/s41396-022-01222-x",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20220405-464784300",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/115726,
    title ="Community Structure and Microbial Associations in Sediment-Free Methanotrophic Enrichment Cultures from a Marine Methane Seep",
    author = "Yu, Hang and Speth, Daan R. and Connon, Stephanie A. and Goudeau, Danielle and Malmstrom, Rex R. and Woyke, Tanja and Orphan, Victoria J.",
    journal = "Applied and Environmental Microbiology",
    volume = "88",
    number = "11",
    pages = "Art. No. e0210921",
    month = "June",
    year = "2022",
    doi = "https://doi.org/10.1128/aem.02109-21",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20220721-8119000",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/113744,
    title ="Exploring Space via Astromycology: A Report on the CIFAR Programs Earth 4D and Fungal Kingdom Inaugural Joint Meeting",
    author = "Case, Nicola T. and Song, Min and Fulford, Avery H. and Graham, Heather V. and Orphan, Victoria J. and Stajich, Jason E. and Casadevall, Arturo and Mustard, John and Heitman, Joseph and Sherwood Lollar, Barbara and Cowen, Leah E.",
    journal = "Astrobiology",
    volume = "22",
    number = "6",
    pages = "637-640",
    month = "June",
    year = "2022",
    doi = "https://doi.org/10.1089/ast.2021.0186",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20220304-60741000",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/115001,
    title ="Early impacts of climate change on a coastal marine microbial mat ecosystem",
    author = "Lingappa, Usha F. and Stein, Nathaniel T. and Metcalfe, Kyle S. and Present, Theodore M. and Orphan, Victoria J. and Grotzinger, John P. and Knoll, Andrew H. and Trower, Elizabeth J. and Gomes, Maya L. and Fischer, Woodward W.",
    journal = "Science Advances",
    volume = "8",
    number = "21",
    pages = "Art. No. eabm7826",
    month = "May",
    year = "2022",
    doi = "https://doi.org/10.1126/sciadv.abm7826",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20220601-258002000",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/112143,
    title ="Putative fossils of chemotrophic microbes preserved in seep carbonates from Vestnesa Ridge, off northwest Svalbard, Norway",
    author = "Himmler, Tobias and Crémière, Antoine and Birgel, Daniel and Wirth, Richard and Orphan, Victoria J. and Kirsimäe, Kalle and Knies, Jochen and Peckmann, Jörn and Lepland, Aivo",
    journal = "Geology",
    volume = "50",
    number = "2",
    pages = "169-173",
    month = "February",
    year = "2022",
    doi = "https://doi.org/10.1130/g49620.1",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20211201-180908972",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/112948,
    title ="Unique mobile elements and scalable gene flow at the prokaryote–eukaryote boundary revealed by circularized Asgard archaea genomes",
    author = "Wu, Fabai and Speth, Daan R. and Philosof, Alon and Crémière, Antoine and Narayanan, Aditi and Barco, Roman A. and Connon, Stephanie A. and Amend, Jan P. and Antoshechkin, Igor A. and Orphan, Victoria J.",
    journal = "Nature Microbiology",
    volume = "7",
    number = "2",
    pages = "200-212",
    month = "February",
    year = "2022",
    doi = "https://doi.org/10.1038/s41564-021-01039-y",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20220118-973186300",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/111085,
    title ="Comparative genomics reveals electron transfer and syntrophic mechanisms differentiating methanotrophic and methanogenic archaea",
    author = "Chadwick, Grayson L. and Skennerton, Connor T. and Laso-Pérez, Rafael and Leu, Andy O. and Speth, Daan R. and Yu, Hang and Morgan-Lang, Connor and Hatzenpichler, Roland and Goudeau, Danielle and Malmstrom, Rex and Brazelton, William J. and Woyke, Tanja and Hallam, Steven J. and Tyson, Gene W. and Wegener, Gunter and Boetius, Antje and Orphan, Victoria J.",
    journal = "PLoS Biology",
    volume = "20",
    number = "1",
    pages = "Art. No. e3001508",
    month = "January",
    year = "2022",
    doi = "https://doi.org/10.1371/journal.pbio.3001508",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20210929-145417503",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/110007,
    title ="Sulfate differentially stimulates but is not respired by diverse anaerobic methanotrophic archaea",
    author = "Yu, Hang and Skennerton, Connor T. and Chadwick, Grayson L. and Leu, Andy O. and Aoki, Masataka and Tyson, Gene W. and Orphan, Victoria J.",
    journal = "ISME Journal",
    volume = "16",
    number = "1",
    pages = "168-177",
    month = "January",
    year = "2022",
    doi = "https://doi.org/10.1038/s41396-021-01047-0",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20210726-170837328",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/111848,
    title ="Methoxyl stable isotopic constraints on the origins and limits of coal-bed methane",
    author = "Lloyd, M. K. and Trembath-Reichert, E. and Dawson, K. S. and Feakins, S. J. and Mastalerz, M. and Orphan, V. J. and Sessions, A. L. and Eiler, J. M.",
    journal = "Science",
    volume = "374",
    number = "6569",
    pages = "894-897",
    month = "November",
    year = "2021",
    doi = "https://doi.org/10.1126/science.abg0241",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20211111-215750456",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/110297,
    title ="Sulfur isotope fractionations constrain the biological cycling of dimethylsulfoniopropionate in the upper ocean",
    author = "Osorio‐Rodriguez, Daniela and Razo-Mejia, Manuel and Dalleska, Nathan F. and Sessions, Alex L. and Orphan, Victoria J. and Adkins, Jess F.",
    journal = "Limnology and Oceanography",
    volume = "66",
    number = "10",
    pages = "3607-3618",
    month = "October",
    year = "2021",
    doi = "https://doi.org/10.1002/lno.11901",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20210817-204334443",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/110149,
    title ="Microbial community of recently discovered Auka vent field sheds light on vent biogeography and evolutionary history of thermophily",
    author = "Speth, Daan R. and Yu, Feiqiao B. and Connon, Stephanie A. and Lim, Sujung and Magyar, John S. and Peña, Manet E. and Quake, Stephen R. and Orphan, Victoria J.",
    
    
    
    
    month = "August",
    year = "2021",
    
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20210804-220359405",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/109805,
    title ="Evidence of a Streamlined Extracellular Electron Transfer Pathway from Biofilm Structure, Metabolic Stratification, and Long-Range Electron Transfer Parameters",
    author = "Jiménez Otero, Fernanda and Chadwick, Grayson L. and Yates, Matthew D. and Mickol, Rebecca L. and Saunders, Scott H. and Glaven, Sarah M. and Gralnick, Jeffrey A. and Newman, Dianne K. and Tender, Leonard M. and Orphan, Victoria J. and Bond, Daniel R.",
    journal = "Applied and Environmental Microbiology",
    volume = "87",
    number = "17",
    pages = "Art. No. AEM.00706-21",
    month = "August",
    year = "2021",
    doi = "https://doi.org/10.1128/aem.00706-21",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20210714-151655967",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/108226,
    title ="Microbial succession and dynamics in meromictic Mono Lake, California",
    author = "Phillips, Alexandra A. and Speth, Daan R. and Miller, Laurence G. and Wang, Xingchen T. and Wu, Fenfang and Medeiros, Patricia M. and Monteverde, Danielle R. and Osburn, Magdalena R. and Berelson, William M. and Betts, Hannah L. and Wijker, Reto S. and Mullin, Sean W. and Johnson, Hope A. and Orphan, Victoria J. and Fischer, Woodward W. and Sessions, Alex L.",
    journal = "Geobiology",
    volume = "19",
    number = "4",
    pages = "376-393",
    month = "July",
    year = "2021",
    doi = "https://doi.org/10.1111/gbi.12437",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20210225-154113785",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/109500,
    title ="Carbonate-hosted microbial communities are prolific and pervasive methane oxidizers at geologically diverse marine methane seep sites",
    author = "Marlow, Jeffrey J. and Hoer, Daniel and Jungbluth, Sean P. and Reynard, Linda M. and Gartman, Amy and Chavez, Marko S. and El-Naggar, Mohamed Y. and Tuross, Noreen and Orphan, Victoria J. and Girguis, Peter R.",
    journal = "Proceedings of the National Academy of Sciences",
    volume = "118",
    number = "25",
    pages = "Art. No. e2006857118",
    month = "June",
    year = "2021",
    doi = "https://doi.org/10.1073/pnas.2006857118",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20210621-144751286",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/109144,
    title ="Controls on Interspecies Electron Transport and Size Limitation of Anaerobically Methane-Oxidizing Microbial Consortia",
    author = "He, Xiaojia and Chadwick, Grayson L. and Kempes, Christopher P. and Orphan, Victoria J. and Meile, Christof",
    journal = "mBio",
    volume = "12",
    number = "3",
    pages = "Art. No. e03620-20",
    month = "May",
    year = "2021",
    doi = "https://doi.org/10.1128/mbio.03620-20",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20210517-093742807",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/108903,
    title ="Spatially Resolved Electron Transport through Anode-Respiring Geobacter sulfurreducens Biofilms: Controls and Constraints",
    author = "He, Xiaojia and Chadwick, Grayson and Jiménez Otero, Fernanda and Orphan, Victoria J. and Meile, Christof",
    journal = "ChemElectroChem",
    volume = "8",
    number = "10",
    pages = "1697",
    month = "May",
    year = "2021",
    
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20210430-122719691",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/108171,
    title ="Spatially Resolved Electron Transport through Anode‐Respiring Geobacter sulfurreducens Biofilms: Controls and Constraints",
    author = "He, Xiaojia and Chadwick, Grayson and Jiménez Otero, Fernanda and Orphan, Victoria and Meile, Christof",
    journal = "ChemElectroChem",
    volume = "8",
    number = "10",
    pages = "1747-1758",
    month = "May",
    year = "2021",
    doi = "https://doi.org/10.1002/celc.202100111",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20210224-105659368",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/108904,
    title ="A chemosynthetic ecotone—\"chemotone\"—in the sediments surrounding deep-sea methane seeps",
    author = "Ashford, Oliver S. and Guan, Shuzhe and Capone, Dante and Rigney, Katherine and Rowley, Katelynn and Orphan, Victoria and Mullin, Sean W. and Dawson, Kat S. and Cortés, Jorge and Rouse, Greg W. and Mendoza, Guillermo F. and Lee, Raymond W. and Cordes, Erik E. and Levin, Lisa A.",
    journal = "Limnology and Oceanography",
    volume = "66",
    number = "5",
    pages = "1687-1702",
    month = "May",
    year = "2021",
    doi = "https://doi.org/10.1002/lno.11713",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20210430-123641944",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/102503,
    title ="Experimentally-validated correlation analysis reveals new anaerobic methane oxidation partnerships with consortium-level heterogeneity in diazotrophy",
    author = "Metcalfe, Kyle S. and Murali, Ranjani and Mullin, Sean W. and Connon, Stephanie A. and Orphan, Victoria J.",
    journal = "ISME Journal",
    volume = "15",
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    month = "February",
    year = "2021",
    doi = "https://doi.org/10.1038/s41396-020-00757-1",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20200413-101943907",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/107508,
    title ="Physiological, genomic, and sulfur isotopic characterization of methanol metabolism by Desulfovibrio carbinolicus",
    author = "Sim, Min Sub and Skennerton, Connor T. and Orphan, Victoria J.",
    journal = "PLoS ONE",
    volume = "16",
    number = "1",
    pages = "Art. No. e0245069",
    month = "January",
    year = "2021",
    doi = "https://doi.org/10.1371/journal.pone.0245069",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20210115-120616827",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/107283,
    title ="Patterns of in situ Mineral Colonization by Microorganisms in a ~60°C Deep Continental Subsurface Aquifer",
    author = "Mullin, Sean W. and Wanger, Greg and Kruger, Brittany R. and Sackett, Joshua D. and Hamilton-Brehm, Scott D. and Bhartia, Rohit and Amend, Jan P. and Moser, Duane P. and Orphan, Victoria J.",
    journal = "Frontiers in Microbiology",
    volume = "11",
    
    pages = "Art. No. 536535",
    month = "November",
    year = "2020",
    doi = "https://doi.org/10.3389/fmicb.2020.536535",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20201224-085808375",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/103049,
    title ="Metabolic strategies of marine subseafloor Chloroflexi inferred from genome reconstructions",
    author = "Fincker, Maeva and Huber, Julie A. and Orphan, Victoria J. and Rappé, Michael S. and Teske, Andreas and Spormann, Alfred M.",
    journal = "Environmental Microbiology",
    volume = "22",
    number = "8",
    pages = "3188-3204",
    month = "August",
    year = "2020",
    doi = "https://doi.org/10.1111/1462-2920.15061",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20200506-150820782",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/102905,
    title ="Resolving micron-scale heterogeneity in porewater δ³⁴S_(H₂S) by combining films for in-situ sulfide capture and secondary ion mass spectrometry",
    author = "Houghton, J. L. and Jones, C. and Dawson, K. S. and Orphan, V. and Gomes, M. L. and Fike, D. A.",
    journal = "Marine Chemistry",
    volume = "223",
    
    pages = "Art. No. 103810",
    month = "June",
    year = "2020",
    doi = "https://doi.org/10.1016/j.marchem.2020.103810",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20200429-124352121",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/101179,
    title ="Lateral Gene Transfer Drives Metabolic Flexibility in the Anaerobic Methane-Oxidizing Archaeal Family Methanoperedenaceae\r\n",
    author = "Leu, Andy O. and McIlroy, Simon J. and Ye, Jun and Parks, Donovan H. and Orphan, Victoria J. and Tyson, Gene W.",
    journal = "mBio",
    volume = "11",
    number = "3",
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    month = "May",
    year = "2020",
    doi = "https://doi.org/10.1128/mBio.01325-20",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20200207-102104518",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/100444,
    title ="Methanotrophic bacterial symbionts fuel dense populations of deep-sea feather duster worms (Sabellida, Annelida) and extend the spatial influence of methane seepage",
    author = "Goffredi, Shana K. and Tilic, Ekin and Mullin, Sean W. and Dawson, Katherine S. and Keller, Abigail and Lee, Raymond W. and Wu, Fabai and Levin, Lisa A. and Rouse, Greg W. and Cordes, Erik E. and Orphan, Victoria J.",
    journal = "Science Advances",
    volume = "6",
    number = "14",
    pages = "Art. No. eaay8562",
    month = "April",
    year = "2020",
    doi = "https://doi.org/10.1126/sciadv.aay8562",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20200102-085056769",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/101051,
    title ="Anaerobic methane oxidation coupled to manganese reduction by members of the Methanoperedenaceae",
    author = "Leu, Andy O. and Cai, Chen and McIlroy, Simon J. and Southam, Gordon and Orphan, Victoria J. and Yuan, Zhiguo and Hu, Shihu and Tyson, Gene W.",
    journal = "ISME Journal",
    volume = "14",
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    month = "April",
    year = "2020",
    doi = "https://doi.org/10.1038/s41396-020-0590-x",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20200203-085914271",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/97550,
    title ="Carbon isotopic heterogeneity of coenzyme F430 and membrane lipids in methane‐oxidizing archaea",
    author = "Bird, Laurence R. and Dawson, Katherine S. and Chadwick, Grayson L. and Fulton, James M. and Orphan, Victoria J. and Freeman, Katherine H.",
    journal = "Geobiology",
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    month = "November",
    year = "2019",
    doi = "https://doi.org/10.1111/gbi.12354",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20190731-105709287",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/99050,
    title ="Peptidoglycan Production by an Insect-Bacterial Mosaic",
    author = "Bublitz, DeAnna C. and Chadwick, Grayson L. and Magyar, John S. and Sandoz, Kelsi M. and Brooks, Diane M. and Mesnage, Stéphane and Ladinsky, Mark S. and Garber, Arkadiy I. and Bjorkman, Pamela J. and Orphan, Victoria J. and McCutcheon, John P.",
    journal = "Cell",
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    month = "October",
    year = "2019",
    doi = "https://doi.org/10.1016/j.cell.2019.08.054",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20191003-113812895",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/98815,
    title ="NanoSIMS imaging reveals metabolic stratification within current-producing biofilms",
    author = "Chadwick, Grayson L. and Jiménez-Otero, Fernanda and Gralnick, Jeffrey A. and Bond, Daniel R. and Orphan, Victoria J.",
    journal = "Proceedings of the National Academy of Sciences of the United States of America",
    volume = "116",
    number = "41",
    pages = "20716-20724",
    month = "October",
    year = "2019",
    doi = "https://doi.org/10.1073/pnas.1912498116",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20190923-160449911",
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@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/99083,
    title ="ASM-Clust: classifying functionally diverse protein families using alignment score matrices",
    author = "Speth, Daan R. and Orphan, Victoria J.",
    
    
    
    
    month = "October",
    year = "2019",
    
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20191004-102107177",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/96656,
    title ="Scientists’ warning to humanity: microorganisms and climate change",
    author = "Cavicchioli, Ricardo and Orphan, Victoria J.",
    journal = "Nature Reviews Microbiology",
    volume = "17",
    number = "9",
    pages = "569-586",
    month = "September",
    year = "2019",
    doi = "https://doi.org/10.1038/s41579-019-0222-5",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20190624-093344374",
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@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/96205,
    title ="Age Mosaicism across Multiple Scales in Adult Tissues",
    author = "Arrojo e Drigo, Rafael and Lev-Ram, Varda and Tyagi, Swati and Ramachandra, Ranjan and Deerinck, Thomas and Bushong, Eric and Phan, Sebastien and Orphan, Victoria and Lechene, Claude and Ellisman, Mark H. and Hetzer, Martin W.",
    journal = "Cell Metabolism",
    volume = "30",
    number = "2",
    pages = "343-351",
    month = "August",
    year = "2019",
    doi = "https://doi.org/10.1016/j.cmet.2019.05.010",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20190607-131617878",
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@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/95945,
    title ="The Cell and the Sum of Its Parts: Patterns of Complexity in Biosignatures as Revealed by Deep UV Raman Spectroscopy",
    author = "Sapers, Haley M. and Razzell Hollis, Joseph and Bhartia, Rohit and Beegle, Luther W. and Orphan, Victoria J. and Amend, Jan P.",
    journal = "Frontiers in Microbiology",
    volume = "10",
    
    pages = "Art. No. 679",
    month = "May",
    year = "2019",
    doi = "https://doi.org/10.3389/fmicb.2019.00679",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20190530-074324675",
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@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/89996,
    title ="Divergent methyl-coenzyme M reductase genes in a deep-subseafloor Archaeoglobi",
    author = "Boyd, Joel A. and Jungbluth, Sean P. and Leu, Andy O. and Evans, Paul N. and Woodcroft, Ben J. and Chadwick, Grayson L. and Orphan, Victoria J. and Amend, Jan P. and Rappé, Michael S. and Tyson, Gene W.",
    journal = "ISME Journal",
    volume = "13",
    number = "5",
    pages = "1269-1279",
    month = "May",
    year = "2019",
    doi = "https://doi.org/10.1038/s41396-018-0343-2",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20180927-114223337",
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@conference_item {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/98365,
    title ="Calorimetric determination of microbial activity in low-\u200benergy environments",
    author = "Amend, Jan and Feyhl-Buska, Jayme and Wu, Fabai and Robador, Alberto and Orphan, Victoria and Finkelstein, Steven",
    
    
    
    pages = "GEOC-0044",
    month = "April",
    year = "2019",
    
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20190830-092706647",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/94306,
    title ="FIND: Identifying Functionally and Structurally Important Features in Protein Sequences with Deep Neural Networks",
    author = "Murali, Ranjani and Hemp, James and Orphan, Victoria and Bisk, Yonatan",
    
    
    
    
    month = "March",
    year = "2019",
    
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20190401-084306692",
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@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/92252,
    title ="Precise determination of equilibrium sulfur isotope effects during volatilization and deprotonation of dissolved H_2S",
    author = "Sim, Min Sub and Sessions, Alex L. and Orphan, Victoria J. and Adkins, Jess F.",
    journal = "Geochimica et Cosmochimica Acta",
    volume = "248",
    
    pages = "242-251",
    month = "March",
    year = "2019",
    doi = "https://doi.org/10.1016/j.gca.2019.01.016",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20190114-132114245",
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@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/91996,
    title ="Microbial interactions in the anaerobic oxidation of methane: Model simulations constrained by process rates and activity patterns",
    author = "He, Xiaojia and Chadwick, Grayson and Kempes, Christopher and Shi, Yimeng and McGlynn, Shawn and Orphan, Victoria and Meile, Christof",
    journal = "Environmental Microbiology",
    volume = "21",
    number = "2",
    pages = "631-647",
    month = "February",
    year = "2019",
    doi = "https://doi.org/10.1111/1462-2920.14507",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20190102-135257356",
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@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/92254,
    title ="The next frontier for planetary and human exploration",
    author = "Stamenković, V. and Fischer, W. W. and Kirschvink, J. L. and Orphan, V. J.",
    journal = "Nature Astronomy",
    volume = "3",
    number = "2",
    pages = "116-120",
    month = "February",
    year = "2019",
    doi = "https://doi.org/10.1038/s41550-018-0676-9",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20190114-133208101",
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@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/92242,
    title ="Role of APS reductase in biogeochemical sulfur isotope fractionation",
    author = "Sim, Min Sub and Ogata, Hideaki and Lubitz, Wolfgang and Adkins, Jess F. and Sessions, Alex L. and Orphan, Victoria J. and McGlynn, Shawn E.",
    journal = "Nature Communications",
    volume = "10",
    
    pages = "Art. No. 44",
    month = "January",
    year = "2019",
    doi = "https://doi.org/10.1038/s41467-018-07878-4",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20190114-083925177",
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@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/91741,
    title ="Comparative Genomics and Proteomic Analysis of Assimilatory Sulfate Reduction Pathways in Anaerobic Methanotrophic Archaea",
    author = "Yu, Hang and Susanti, Dwi and McGlynn, Shawn E. and Skennerton, Connor T. and Chourey, Karuna and Iyer, Ramsunder and Scheller, Silvan and Tavormina, Patricia L. and Hettich, Robert L. and Mukhopadhyay, Biswarup and Orphan, Victoria J.",
    journal = "Frontiers in Microbiology",
    volume = "9",
    
    pages = "Art. No. 2917",
    month = "December",
    year = "2018",
    doi = "https://doi.org/10.3389/fmicb.2018.02917",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20181212-151637497",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/87541,
    title ="Widespread nitrogen fixation in sediments from diverse deep-sea sites of elevated carbon loading",
    author = "Dekas, Anne E. and Fike, David A. and Chadwick, Grayson L. and Green-Saxena, Abigail and Fortney, Julian and Connon, Stephanie A. and Dawson, Katherine and Orphan, Victoria J.",
    journal = "Environmental Microbiology",
    volume = "20",
    number = "12",
    pages = "4281-4296",
    month = "December",
    year = "2018",
    doi = "https://doi.org/10.1111/1462-2920.14342",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20180703-145300132",
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@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/87789,
    title ="Convergent evolution of unusual complex I homologs with increased proton pumping capacity: energetic and ecological implications",
    author = "Chadwick, Grayson L. and Hemp, James and Fischer, Woodward W. and Orphan, Victoria J.",
    journal = "ISME Journal",
    volume = "12",
    number = "11",
    pages = "2668-2680",
    month = "November",
    year = "2018",
    doi = "https://doi.org/10.1038/s41396-018-0210-1",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20180711-165717508",
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@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/89898,
    title ="Methane on Mars and Habitability: Challenges and Responses",
    author = "Yung, Yuk L. and Chen, Pin and Nealson, Kenneth and Atreya, Sushil and Beckett, Patrick and Blank, Jennifer G. and Ehlmann, Bethany and Eiler, John and Etiope, Giuseppe and Ferry, James G. and Forget, François and Gao, Peter and Hu, Renyu and Kleinböhl, Armin and Klusman, Ronald and Lefèvre, Franck and Miller, Charles and Mischna, Michael and Mumma, Michael and Newman, Sally and Oehler, Dorothy and Okumura, Mitchio and Oremland, Ronald and Orphan, Victoria and Popa, Radu and Russell, Michael and Shen, Linhan and Sherwood Lollar, Barbara and Staehle, Robert and Stamenković, Vlada and Stolper, Daniel and Templeton, Alexis and Vandaele, Ann C. and Viscardy, Sébastien and Webster, Christopher R. and Wennberg, Paul O. and Wong, Michael L. and Worden, John",
    journal = "Astrobiology",
    volume = "18",
    number = "10",
    pages = "1221-1242",
    month = "October",
    year = "2018",
    doi = "https://doi.org/10.1089/ast.2018.1917",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20180925-073151228",
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@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/89754,
    title ="The gut of the finch: uniqueness of the gut microbiome of the Galápagos vampire finch",
    author = "Michel, Alice J. and Ward, Lewis M. and Goffredi, Shana K. and Dawson, Katherine S. and Baldassarre, Daniel T. and Brenner, Alec and Gotanda, Kiyoko M. and McCormack, John E. and Mullin, Sean W. and O’Neill, Ariel and Tender, Gabrielle S. and Uy, J. Albert C. and Yu, Kristie and Orphan, Victoria J. and Chaves, Jaime A.",
    journal = "Microbiome",
    volume = "6",
    
    pages = "Art. No. 167",
    month = "September",
    year = "2018",
    doi = "https://doi.org/10.1186/s40168-018-0555-8",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20180919-102939169",
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@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/89965,
    title ="Metabolic marker gene mining provides insight in global mcrA diversity and, coupled with targeted genome reconstruction, sheds further light on metabolic potential of the Methanomassiliicoccales",
    author = "Speth, Daan R. and Orphan, Victoria J.",
    journal = "PeerJ",
    volume = "2018",
    number = "6",
    pages = "Art. No. e5614",
    month = "September",
    year = "2018",
    doi = "https://doi.org/10.7717/peerj.5614",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20180926-133207423",
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@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/87091,
    title ="Deep-biosphere methane production stimulated by geofluids in the Nankai accretionary complex",
    author = "Ijiri, Akira and Case, David H. and Orphan, Victoria J.",
    journal = "Science Advances",
    volume = "4",
    number = "6",
    pages = "Art. No. eaao4631",
    month = "June",
    year = "2018",
    doi = "https://doi.org/10.1126/sciadv.aao4631",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20180613-160656492",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/85740,
    title ="Subgroup characteristics of marine methane-oxidizing ANME-2 archaea and their syntrophic partners revealed by integrated multimodal analytical microscopy",
    author = "McGlynn, Shawn E. and Chadwick, Grayson L. and O'Neill, Ariel and Mackey, Mason and Thor, Andrea and Deerinck, Thomas J. and Ellisman, Mark H. and Orphan, Victoria J.",
    journal = "Applied and Environmental Microbiology",
    volume = "84",
    number = "11",
    pages = "Art. No. e00399-18",
    month = "June",
    year = "2018",
    doi = "https://doi.org/10.1128/AEM.00399-18",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20180411-080037971",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/81087,
    title ="Subnanogram proteomics: impact of LC column selection, MS instrumentation and data analysis strategy on proteome coverage for trace samples",
    author = "Zhu, Ying and Zhao, Rui and Piehowski, Paul D. and Moore, Ronald J. and Lim, Sujung and Orphan, Victoria J. and Paša-Tolić, Ljiljana and Qian, Wei-Jun and Smith, Richard D. and Kelly, Ryan T.",
    journal = "International Journal of Mass Spectrometry",
    volume = "427",
    
    pages = "4-10",
    month = "April",
    year = "2018",
    doi = "https://doi.org/10.1016/j.ijms.2017.08.016",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20170901-140533444",
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@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/83447,
    title ="Interrogating marine virus-host interactions and elemental transfer with BONCAT and nanoSIMS-based methods",
    author = "Pasulka, Alexis L. and Thamatrakoln, Kimberlee and Kopf, Sebastian H. and Guan, Yunbin and Poulos, Bonnie and Moradian, Annie and Sweredoski, Michael J. and Hess, Sonja and Sullivan, Mathew B. and Bidle, Kay D. and Orphan, Victoria J.",
    journal = "Environmental Microbiology",
    volume = "20",
    number = "2",
    pages = "671-692",
    month = "February",
    year = "2018",
    doi = "https://doi.org/10.1111/1462-2920.13996",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20171127-134624207",
}
@techreport {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/86060,
    title ="Methane on Mars and Habitability: Challenges and Responses",
    author = "Yung, Yuk L. and Chen, Pin and Nealson, Kenneth and Atreya, Sushil and Beckett, Patrick and Blank, Jennifer and Ehlmann, Bethany and Eiler, John and Etiope, Giuseppe and Ferry, James G. and Forget, Francois and Gao, Peter and Hu, Renyu and Kleinböhl, Armin and Klusman, Ronald and Lefèvre, Franck and Miller, Charles and Mischna, Michael and Mumma, Michael and Newman, Sally and Oehler, Dorothy and Okumura, Mitchio and Oremland, Ronald and Orphan, Victoria and Popa, Radu and Russell, Michael and Shen, Linhan and Sherwood Lollar, Barbara and Stamenković, Vlada and Staehle, Robert and Stolper, Daniel and Templeton, Alexis and Vandaele, Ann C. and Viscardy, Sébastien and Webster, Chris and Wennberg, Paul O. and Wong, Michael and Worden, John",
    journal = "Astrobiology",
    volume = "18",
    
    pages = "1221-1242",
    month = "January",
    year = "2018",
    
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20180426-110252898",
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@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/82597,
    title ="Spatially resolved capture of hydrogen sulfide from the water column and sedimentary pore waters for abundance and stable isotopic analysis",
    author = "Fike, D. A. and Houghton, J. L. and Moore, S. E. and Gilhooly, W. P. and Dawson, K. S. and Druschel, G. K. and Amend, J. P. and Orphan, V. J.",
    journal = "Marine Chemistry",
    volume = "197",
    
    pages = "26-37",
    month = "December",
    year = "2017",
    doi = "https://doi.org/10.1016/j.marchem.2017.10.004",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20171023-152816244",
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@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/84116,
    title ="Aerobic and Anaerobic Methanotrophic Communities Associated with Methane Hydrates Exposed on the Seafloor: A High-Pressure Sampling and Stable Isotope-Incubation Experiment",
    author = "Case, David H. and Ijiri, Akira and Morono, Yuki and Tavormina, Patricia and Orphan, Victoria J. and Inagaki, Fumio",
    journal = "Frontiers in Microbiology",
    volume = "8",
    
    pages = "Art. No. 2569",
    month = "December",
    year = "2017",
    doi = "https://doi.org/10.3389/fmicb.2017.02569",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20180105-082606163",
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@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/82111,
    title ="Methyl-compound use and slow growth characterize microbial life in 2-km-deep subseafloor coal and shale beds",
    author = "Trembath-Reichert, Elizabeth and Morono, Yuki and Ijiri, Akira and Hoshino, Tatsuhiko and Dawson, Katherine S. and Inagaki, Fumio and Orphan, Victoria J.",
    journal = "Proceedings of the National Academy of Sciences of the United States of America",
    volume = "114",
    number = "44",
    pages = "E9206-E9215",
    month = "October",
    year = "2017",
    doi = "https://doi.org/10.1073/pnas.1707525114",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20171005-093343465",
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@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/77616,
    title ="Autotrophic and heterotrophic acquisition of carbon and nitrogen by a mixotrophic chrysophyte established through stable isotope analysis",
    author = "Terrado, Ramon and Pasulka, Alexis L. and Lie, Alle A.-Y. and Orphan, Victoria J. and Heidelberg, Karla B. and Caron, David A.",
    journal = "ISME Journal",
    volume = "11",
    number = "9",
    pages = "2022-2034",
    month = "September",
    year = "2017",
    doi = "https://doi.org/10.1038/ismej.2017.68",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20170522-080446020",
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@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/79841,
    title ="Methane-Fueled Syntrophy through Extracellular Electron Transfer: Uncovering the Genomic Traits Conserved within Diverse Bacterial Partners of Anaerobic Methanotrophic Archaea",
    author = "Skennerton, Connor T. and Chourey, Karuna and Iyer, Ramsunder and Hettich, Robert L. and Tyson, Gene W. and Orphan, Victoria J. and Dubilier, Nicole",
    journal = "mBio",
    volume = "8",
    number = "4",
    pages = "Art. No. e00530-17",
    month = "August",
    year = "2017",
    doi = "https://doi.org/10.1128/mBio.00530-17",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20170807-095231730",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/81447,
    title ="Monodeuterated Methane, an Isotopic Tool To Assess Biological Methane Metabolism Rates",
    author = "Marlow, Jeffrey J. and Steele, Joshua A. and Ziebis, Wiebke and Scheller, Silvan and Case, David and Reynard, Linda M. and Orphan, Victoria J.",
    journal = "mSphere",
    volume = "2",
    number = "4",
    pages = "Art. No. e00309",
    month = "July",
    year = "2017",
    doi = "https://doi.org/10.1128/mSphereDirect.00309-17",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20170914-133025440",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/74554,
    title ="Quantification and isotopic analysis of intracellular sulfur metabolites in the dissimilatory sulfate reduction pathway",
    author = "Sim, Min Sub and Paris, Guillaume and Adkins, Jess F. and Orphan, Victoria J. and Sessions, Alex L.",
    journal = "Geochimica et Cosmochimica Acta",
    volume = "206",
    
    pages = "57-72",
    month = "June",
    year = "2017",
    doi = "https://doi.org/10.1016/j.gca.2017.02.024",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20170227-143517457",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/85749,
    title ="Trace Metal Imaging of Sulfate-Reducing Bacteria and Methanogenic Archaea at Single-Cell Resolution by Synchrotron X-Ray Fluorescence Imaging",
    author = "Glass, Jennifer B. and Chen, Si and Dawson, Katherine S. and Horton, Damian R. and Vogt, Stefan and Ingall, Ellery D. and Twining, Benjamin S. and Orphan, Victoria J.",
    journal = "Geomicrobiology Journal",
    volume = "35",
    number = "1",
    pages = "81-89",
    month = "May",
    year = "2017",
    doi = "https://doi.org/10.1080/01490451.2017.1321068",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20180411-113723264",
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@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/74756,
    title ="Rapid Quantification and Isotopic Analysis of Dissolved Sulfur Species",
    author = "Smith, Derek A. and Sessions, Alex L. and Dalleska, Nathan and Orphan, Victoria J.",
    journal = "Rapid Communications in Mass Spectrometry",
    volume = "31",
    number = "9",
    pages = "791-803",
    month = "May",
    year = "2017",
    doi = "https://doi.org/10.1002/rcm.7846",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20170306-080715333",
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@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/71196,
    title ="Starvation and recovery in the deep-sea methanotroph Methyloprofundus sedimenti",
    author = "Tavormina, Patricia L. and Kellermann, Matthias Y. and Antony, Chakkiath Paul and Tocheva, Elitza I. and Dalleska, Nathan F. and Jensen, Ashley J. and Valentine, David L. and Hinrichs, Kai-Uwe and Jensen, Grant J. and Dubilier, Nicole and Orphan, Victoria J.",
    journal = "Molecular Microbiology",
    volume = "103",
    number = "2",
    pages = "242-252",
    month = "January",
    year = "2017",
    doi = "https://doi.org/10.1111/mmi.13553",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20161017-155437081",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/66226,
    title ="Phylogenomic analysis of Candidatus ‘Izimaplasma’ species: free-living representatives from a Tenericutes clade found in methane seeps",
    author = "Skennerton, Connor T. and Haroon, Mohamed F. and Briegel, Ariane and Shi, Jian and Jensen, Grant J. and Tyson, Gene W. and Orphan, Victoria J.",
    journal = "ISME Journal",
    volume = "10",
    number = "11",
    pages = "2679-2692",
    month = "November",
    year = "2016",
    doi = "https://doi.org/10.1038/ismej.2016.55",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20160418-080655842",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/69506,
    title ="Measurement of rare isotopologues of nitrous oxide by high-resolution multi-collector mass spectrometry",
    author = "Magyar, Paul M. and Orphan, Victoria J. and Eiler, John M.",
    journal = "Rapid Communications in Mass Spectrometry",
    volume = "30",
    number = "17",
    pages = "1923-1940",
    month = "September",
    year = "2016",
    doi = "https://doi.org/10.1002/rcm.7671",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20160808-234129625",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/63109,
    title ="Microbial eukaryotic distributions and diversity patterns in a deep-sea methane seep ecosystem",
    author = "Pasulka, Alexis L. and Levin, Lisa A. and Steele, Josh A. and Case, David H. and Landry, Michael R. and Orphan, Victoria J.",
    journal = "Environmental Microbiology",
    volume = "18",
    number = "9",
    pages = "3022-3043",
    month = "September",
    year = "2016",
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}
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    title ="Characterization of Chemosynthetic Microbial Mats Associated with Intertidal Hydrothermal Sulfur Vents in White Point, San Pedro, CA, USA",
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}
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    title ="Proteomic Stable Isotope Probing Reveals Biosynthesis Dynamics of Slow Growing Methane Based Microbial Communities",
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}
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}
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@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/63308,
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}
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}
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    title ="Methane Seep Carbonates Host Distinct, Diverse, and Dynamic Microbial Assemblages",
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@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/63309,
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}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/59070,
    title ="Single cell activity reveals direct electron transfer in methanotrophic consortia",
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    title ="A novel sister clade to the enterobacteria microviruses (family Microviridae) identified in methane seep sediments",
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    journal = "Environmental Microbiology",
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@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/61456,
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    journal = "Microbial Ecology",
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@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/57229,
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@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/56756,
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}
@book_section {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/79111,
    title ="Detection of Protein-Synthesizing Microorganisms in the Environment via Bioorthogonal Noncanonical Amino Acid Tagging (BONCAT)",
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    pages = "145-157",
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}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/51567,
    title ="Methyloprofundus sedimenti gen. nov., sp. nov., an obligate methanotroph from ocean sediment belonging to the ‘deep sea-1’ clade of marine methanotrophs",
    author = "Tavormina, Patricia L. and Hatzenpichler, Roland and McGlynn, Shawn E. and Chadwick, Grayson and Dawson, Katherine S. and Connon, Stephanie A. and Orphan, Victoria J.",
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    url = "https://resolver.caltech.edu/CaltechAUTHORS:20141111-104738855",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/53247,
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    url = "https://resolver.caltech.edu/CaltechAUTHORS:20150107-070238329",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/52204,
    title ="Spatial variability in photosynthetic and heterotrophic activity drives localized δ^(13)C_(org) fluctuations and carbonate precipitation in hypersaline microbial mats",
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    journal = "Geobiology",
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}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/49939,
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    url = "https://resolver.caltech.edu/CaltechAUTHORS:20140923-111251974",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/50167,
    title ="Carbonate-hosted methanotrophy represents an unrecognized methane sink in the deep sea",
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    journal = "Nature Communications",
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}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/52235,
    title ="Spatial distribution of nitrogen fixation in methane seep sediment and the role of the ANME archaea",
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    journal = "Environmental Microbiology",
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    url = "https://resolver.caltech.edu/CaltechAUTHORS:20141201-133733752",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/44082,
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}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/47287,
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    journal = "Environmental Microbiology",
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    url = "https://resolver.caltech.edu/CaltechAUTHORS:20140717-091139174",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/44532,
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    url = "https://resolver.caltech.edu/CaltechAUTHORS:20140326-130213946",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/44740,
    title ="The Potential for Biologically Catalyzed Anaerobic Methane Oxidation on Ancient Mars",
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    doi = "https://doi.org/10.1089/ast.2013.1078",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20140408-093723442",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/44218,
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}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/43402,
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}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/41361,
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    url = "https://resolver.caltech.edu/CaltechAUTHORS:20130917-101809185",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/41193,
    title ="Polyphosphate Storage during Sporulation in the Gram-Negative Bacterium Acetonema longum",
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}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/47452,
    title ="Autonomous Application of Quantitative PCR in the Deep Sea: In Situ Surveys of Aerobic Methanotrophs Using the Deep-Sea Environmental Sample Processor",
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    journal = "Environmental Science and Technology",
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    year = "2013",
    doi = "https://doi.org/10.1021/es4023199",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20140723-162327897",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/38983,
    title ="Abundance and distribution of diverse membrane-bound monooxygenase (Cu-MMO) genes within the Costa Rica oxygen minimum zone",
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    journal = "Environmental Microbiology Reports",
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    month = "June",
    year = "2013",
    doi = "https://doi.org/10.1111/1758-2229.12025",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20130619-100723976",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/44207,
    title ="Global molecular analyses of methane metabolism in methanotrophic Alphaproteobacterium, Methylosinus trichosporium OB3b. Part II. metabolomics and 13C-labeling study",
    author = "Yang, Song and Matsen, Janet B. and Kunopka, Michael and Green-Saxena, Abigail and Clubb, Justin and Sadilek, Martin and Orphan, Victoria J. and Beck, David and Kalyuzhnaya, Marina G.",
    journal = "Frontiers in Microbiology",
    volume = "4",
    
    pages = "Art. No. 70",
    month = "April",
    year = "2013",
    doi = "https://doi.org/10.3389/fmicb.2013.00070",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20140310-084832957",
}
@conference_item {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/42181,
    title ="High resolution profiling of sulfur and oxygen speciation in microbial mats: Implications for coupling of hydrogen peroxide with sulfur species",
    author = "Druschel, Greg K. and Kafantaris, Fotios and Orphan, Victoria J. and Houghton, Jennifer and Fike, David A.",
    
    
    
    pages = "GEOC-38",
    month = "April",
    year = "2013",
    
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20131101-092236803",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/37576,
    title ="Classifying the metal dependence of uncharacterized nitrogenases",
    author = "McGlynn, Shawn E. and Boyd, Eric S. and Peters, John W. and Orphan, Victoria J.",
    journal = "Frontiers in Microbiology",
    volume = "3",
    
    pages = "Art. No. 419",
    month = "January",
    year = "2013",
    doi = "https://doi.org/10.3389/fmicb.2012.00419 ",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20130320-133744148",
}
@book_section {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/41620,
    title ="Whole Cell Immunomagnetic Enrichment of Environmental Microbial Consortia Using rRNA-Targeted Magneto-FISH",
    author = "Trembath-Reichert, Elizabeth and Green-Saxena, Abigail and Orphan, Victoria J.",
    
    
    number = "531",
    pages = "21-44",
    month = "January",
    year = "2013",
    doi = "https://doi.org/10.1016/B978-0-12-407863-5.00002-2",
    isbn = "9780124078635",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20131002-134144694",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/36242,
    title ="Active sulfur cycling by diverse mesophilic and thermophilic microorganisms in terrestrial mud volcanoes of Azerbaijan",
    author = "Green-Saxena, A. and Feyzullayev, A. and Hubert, C. R. J. and Kallmeyer, J. and Krueger, M. and Sauer, P. U. and Schulz, H.-M. and Orphan, V. J.",
    journal = "Environmental Microbiology",
    volume = "14",
    number = "12",
    pages = "3271-3286",
    month = "December",
    year = "2012",
    doi = "https://doi.org/10.1111/1462-2920.12015   ",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20130108-135620155",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/39808,
    title ="Measurement of nitrous oxide isotopologues and isotopomers by the MAT 253 Ultra",
    author = "Magyar, Paul and Kopf, Sebastian and Orphan, Victoria and Eiler, John",
    journal = "Mineralogical Magazine",
    volume = "76",
    number = "6",
    pages = "2054-2054",
    month = "November",
    year = "2012",
    
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20130807-132330822",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/47451,
    title ="Environmental Microbiology: evolution of your premier journal",
    author = "Polz, Martin and Orphan, Victoria and Bonfante, Paola",
    journal = "Environmental Microbiology",
    volume = "14",
    number = "10",
    pages = "2617-2619",
    month = "October",
    year = "2012",
    doi = "https://doi.org/10.1111/j.1462-2920.2012.02869.x",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20140723-162327760",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/33305,
    title ="Archaea in metazoan diets: implications for food webs and biogeochemical cycling",
    author = "Thurber, Andrew R. and Levin, Lisa A. and Orphan, Victoria J. and Marlow, Jeffrey J.",
    journal = "ISME Journal",
    volume = "6",
    number = "8",
    pages = "1602-1612",
    month = "August",
    year = "2012",
    doi = "https://doi.org/10.1038/ismej.2012.16",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20120817-140759648",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/32041,
    title ="A hydrothermal seep on the Costa Rica margin: middle ground in a continuum of reducing ecosystems",
    author = "Levin, Lisa A. and Orphan, Victoria J. and Rouse, Greg W. and Rathburn, Anthony E. and Ussler, William, III and Cook, Geoffrey S. and Goffredi, Shana K. and Perez, Elena M. and Waren, Anders and Grupe, Benjamin M. and Chadwick, Grayson and Strickrott, Bruce",
    journal = "Proceedings of the Royal Society of London. Series B, Biological Sciences",
    volume = "279",
    number = "1738",
    pages = "2580-2588",
    month = "July",
    year = "2012",
    doi = "https://doi.org/10.1098/rspb.2012.0205 ",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20120622-114155202",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/31541,
    title ="Method for Assessing Mineral Composition-Dependent Patterns in Microbial Diversity Using Magnetic and Density Separation",
    author = "Harrison, Benjamin K. and Orphan, Victoria J.",
    journal = "Geomicrobiology Journal",
    volume = "29",
    number = "5",
    pages = "435-449",
    month = "March",
    year = "2012",
    doi = "https://doi.org/10.1080/01490451.2011.581327   ",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20120518-133946986",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/29686,
    title ="Trace metal requirements for microbial enzymes involved in the production and consumption of methane and nitrous oxide",
    author = "Glass, Jennifer B. and Orphan, Victoria J.",
    journal = "Frontiers in Microbiology",
    volume = "3",
    
    pages = "Art. No. 61",
    month = "February",
    year = "2012",
    doi = "https://doi.org/10.3389/fmicb.2012.00061",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20120312-095005613",
}
@book_section {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/35307,
    title ="Molecular biology's contributions to geobiology",
    author = "Newman, Dianne K. and Orphan, Victoria J. and Reysenbach, Anna-Louise",
    
    
    
    pages = "228-249",
    month = "January",
    year = "2012",
    
    
    isbn = "9781118280812",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20121106-134254144",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/29146,
    title ="Dimorphism in methane seep-dwelling ecotypes of the largest known bacteria",
    author = "Bailey, Jake V. and Salman, Verena and Rouse, Gregory W. and Schulz-Vogt, Heide N. and Levin, Lisa A. and Orphan, Victoria J.",
    journal = "ISME Journal",
    volume = "5",
    number = "12",
    pages = "1926-1935",
    month = "December",
    year = "2011",
    doi = "https://doi.org/10.1038/ismej.2011.66",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20120206-101449345",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/51702,
    title ="The Apparent Involvement of ANMEs in Mineral Dependent Methane Oxidation, as an Analog for Possible Martian Methanotrophy",
    author = "House, Christopher H. and Beal, Emily J. and Orphan, Victoria J.",
    journal = "Life",
    volume = "1",
    number = "1",
    pages = "19-33",
    month = "November",
    year = "2011",
    doi = "https://doi.org/10.3390/life1010019",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20141113-095602878",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/25114,
    title ="Microbiology: Hydrogen for dinner",
    author = "Orphan, Victoria J. and Hoehler, Tori M.",
    journal = "Nature",
    volume = "476",
    number = "7359",
    pages = "154-155",
    month = "August",
    year = "2011",
    doi = "https://doi.org/10.1038/476154a",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20110826-090605868",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/23239,
    title ="Multicellular photo-magnetotactic bacteria",
    author = "Shapiro, Orr H. and Hatzenpichler, Roland and Buckley, Daniel H. and Zinder, Stephen H. and Orphan, Victoria J.",
    journal = "Environmental Microbiology Reports",
    volume = "3",
    number = "2",
    pages = "233-238",
    month = "April",
    year = "2011",
    doi = "https://doi.org/10.1111/j.1758-2229.2010.00215.x",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20110404-113053920",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/47450,
    title ="Fish-Sims: Characterizing the Metabolic Potential and Interspecies Interactions between Uncultured Environmental Microorganisms",
    author = "Orphan, Victoria",
    journal = "Biophysical Journal",
    volume = "100",
    number = "3, S1",
    pages = "37a",
    month = "February",
    year = "2011",
    
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20140723-162327659",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/22708,
    title ="A novel family of functional operons encoding methane/ammonia monooxygenase-related proteins in gammaproteobacterial methanotrophs",
    author = "Tavormina, Patricia L. and Orphan, Victoria J. and Kalyuzhnaya, Marina G. and Jetten, Mike S. M. and Klotz, Martin G.",
    journal = "Environmental Microbiology Reports",
    volume = "3",
    number = "1",
    pages = "91-100",
    month = "February",
    year = "2011",
    doi = "https://doi.org/10.1111/j.1758-2229.2010.00192.x ",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20110308-093513808",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/22687,
    title ="Getting cozy: hidden microbial interactions in nature",
    author = "Orphan, Victoria J.",
    journal = "Environmental Microbiology Reports",
    volume = "3",
    number = "1",
    pages = "16-18",
    month = "February",
    year = "2011",
    doi = "https://doi.org/10.1111/j.1758-2229.2010.00236.x",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20110307-110634731",
}
@book_section {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/23702,
    title ="Identification of Diazotrophic Microorganisms in Marine Sediment via Fluorescence In Situ Hybridization Coupled to Nanoscale Secondary Ion Mass Spectrometry (FISH-NanoSIMS)",
    author = "Dekas, Anne E. and Orphan, Victoria J.",
    
    
    number = "486",
    pages = "281-305",
    month = "January",
    year = "2011",
    doi = "https://doi.org/10.1016/B978-0-12-381294-0.00012-2 ",
    isbn = "9780123812940",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20110518-083725900",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/18649,
    title ="Distributions of putative aerobic methanotrophs in diverse pelagic marine environments",
    author = "Tavormina, Patricia L. and Ussler, William, III and Joye, Samantha B. and Harrison, Benjamin K. and Orphan, Victoria J.",
    journal = "ISME Journal",
    volume = "4",
    number = "5",
    pages = "700-710",
    month = "May",
    year = "2010",
    doi = "https://doi.org/10.1038/ismej.2009.155",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20100611-084926449",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/17668,
    title ="Bacterial community shifts in taxa and diversity in response to localized organic loading in the deep sea",
    author = "Goffredi, Shana K. and Orphan, Victoria J.",
    journal = "Environmental Microbiology",
    volume = "12",
    number = "2",
    pages = "344-363",
    month = "February",
    year = "2010",
    doi = "https://doi.org/10.1111/j.1462-2920.2009.02072.x ",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20100304-142423277",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/17627,
    title ="Pseudofossils in relict methane seep carbonates resemble endemic microbial consortia",
    author = "Bailey, Jake V. and Raub, Timothy D. and Meckler, A. Nele and Harrison, Benjamin K. and Raub, Theresa M. D. and Green, Abigail M. and Orphan, Victoria J.",
    journal = "Palaeogeography, Palaeoclimatology, Palaeoecology",
    volume = "285",
    number = "1-2",
    pages = "131-142",
    month = "January",
    year = "2010",
    doi = "https://doi.org/10.1016/j.palaeo.2009.11.002",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20100302-113604574",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/17062,
    title ="Chemotrophic Microbial Mats and Their Potential for Preservation in the Rock Record",
    author = "Bailey, Jake V. and Orphan, Victoria J. and Joye, Samantha B. and Corsetti, Frank A.",
    journal = "Astrobiology",
    volume = "9",
    number = "9",
    pages = "843-859",
    month = "November",
    year = "2009",
    doi = "https://doi.org/10.1089/ast.2008.0314",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20100105-130209242",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/16813,
    title ="Deep-Sea Archaea Fix and Share Nitrogen in Methane-Consuming Microbial Consortia",
    author = "Dekas, Anne E. and Poretsky, Rachel S. and Orphan, Victoria J.",
    journal = "Science",
    volume = "326",
    number = "5951",
    pages = "422-426",
    month = "October",
    year = "2009",
    doi = "https://doi.org/10.1126/science.1178223 ",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20091125-115957263",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/17327,
    title ="The effect of sulfate concentration on (sub)millimeter-scale sulfide δ^(34)S in hypersaline cyanobacterial mats over the diurnal cycle",
    author = "Fike, David A. and Finke, Niko and Zha, Jessica and Blake, Garrett and Hoehler, Tori M. and Orphan, Victoria J.",
    journal = "Geochimica et Cosmochimica Acta",
    volume = "73",
    number = "20",
    pages = "6187-6204",
    month = "October",
    year = "2009",
    doi = "https://doi.org/10.1016/j.gca.2009.07.006 ",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20100127-153113402",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/16031,
    title ="Extensive carbon isotopic heterogeneity among methane seep microbiota",
    author = "House, Christopher H. and Orphan, Victoria J. and Turk, Kendra A. and Thomas, Burt and Pernthaler, Annelie and Vrentas, Jennifer M. and Joye, Samantha B.",
    journal = "Environmental Microbiology",
    volume = "11",
    number = "9",
    pages = "2207-2215",
    month = "September",
    year = "2009",
    doi = "https://doi.org/10.1111/j.1462-2920.2009.01934.x",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20090923-143137088",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/14795,
    title ="Manganese- and iron-dependent marine methane oxidation",
    author = "Beal, Emily J. and House, Christopher H. and Orphan, Victoria J.",
    journal = "Science",
    volume = "325",
    number = "5937",
    pages = "184-187",
    month = "July",
    year = "2009",
    doi = "https://doi.org/10.1126/science.1169984",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20090804-142607950",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/15698,
    title ="Patterns of ^(15)N assimilation and growth of methanotrophic ANME-2 archaea and sulfate-reducing bacteria within structured syntrophic consortia revealed by FISH-SIMS",
    author = "Orphan, Victoria J. and Turk, Kendra A. and Green, Abigail M. and House, Christopher H.",
    journal = "Environmental Microbiology",
    volume = "11",
    number = "7",
    pages = "1777-1791",
    month = "July",
    year = "2009",
    doi = "https://doi.org/10.1111/j.1462-2920.2009.01903.x",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20090909-123033461",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/15699,
    title ="Geobiological investigations using secondary ion mass spectrometry: microanalysis of extant and paleo-microbial processes",
    author = "Orphan, V. J. and House, C. H.",
    journal = "Geobiology",
    volume = "7",
    number = "3",
    pages = "360-372",
    month = "June",
    year = "2009",
    doi = "https://doi.org/10.1111/j.1472-4669.2009.00201.x",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20090909-130537989",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/47448,
    title ="High resolution SIMS-based sulfide δ^(34)S: A new tool for characterizing microbial activity in a variety of depositional environments",
    author = "Fike, David A. and Orphan, Victoria J.",
    journal = "Geochimica et Cosmochimica Acta",
    volume = "73",
    number = "13, S",
    pages = "A375",
    month = "June",
    year = "2009",
    
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20140723-162327430",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/15701,
    title ="Methods for unveiling cryptic microbial partnerships in nature",
    author = "Orphan, Victoria J.",
    journal = "Current Opinion in Microbiology",
    volume = "12",
    number = "3",
    pages = "231-237",
    month = "June",
    year = "2009",
    doi = "https://doi.org/10.1016/j.mib.2009.04.003",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20090909-131707316",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/14500,
    title ="Variations in archaeal and bacterial diversity associated with the sulfate-methane transition zone in continental margin sediments (Santa Barbara Basin, California)",
    author = "Harrison, Benjamin K. and Zhang, Husen and Berelson, Will and Orphan, Victoria J.",
    journal = "Applied and Environmental Microbiology",
    volume = "75",
    number = "6",
    pages = "1487-1499",
    month = "March",
    year = "2009",
    doi = "https://doi.org/10.1128/AEM.01812-08",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20090706-143447493",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/14087,
    title ="Characterization and spatial distribution of methanogens and methanogenic biosignatures in hypersaline microbial mats of Baja California",
    author = "Orphan, V. J. and Jahnke, L. L. and Embaye, T. and Turk, K. A. and Pernthaler, A. and Summons, R. E. and Des Marais, D. J.",
    journal = "Geobiology",
    volume = "6",
    number = "4",
    pages = "376-393",
    month = "September",
    year = "2008",
    doi = "https://doi.org/10.1111/j.1472-4669.2008.00166.x",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20090427-131232717",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/13272,
    title ="Lipid biomarker and phylogenetic analyses to reveal archaeal biodiversity and distribution in hypersaline microbial mat and underlying sediment",
    author = "Jahnke, L. L. and Orphan, V. J. and Embaye, T. and Kubo, M. D. and Summons, R. E. and Des Marais, D. J.",
    journal = "Geobiology",
    volume = "6",
    number = "4",
    pages = "394-410",
    month = "September",
    year = "2008",
    doi = "https://doi.org/10.1111/j.1472-4669.2008.00165.x",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:JAHgbi08",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/37731,
    title ="Micron-scale mapping of sulfur cycling across the oxycline of a cyanobacterial mat",
    author = "Fike, David A. and Gammon, Crystal L. and Finke, Niko and Hoehler, Tori and Turk, Kendra and Orphan, Victoria J.",
    journal = "Geochimica et Cosmochimica Acta",
    volume = "72",
    number = "12",
    pages = "A268",
    month = "July",
    year = "2008",
    doi = "https://doi.org/10.1016/j.gca.2008.05.009",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20130402-154755386",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/38423,
    title ="Micron-scale mapping of sulfur cycling across the oxycline of a cyanobacterial mat: a paired nanoSIMS and CARD-FISH approach",
    author = "Fike, David Andrew and Gammon, Crystal Lynn and Ziebis, Wiebke and Orphan, Victoria Jeanne",
    journal = "ISME Journal",
    volume = "2",
    number = "7",
    pages = "749-759",
    month = "July",
    year = "2008",
    doi = "https://doi.org/10.1038/ismej.2008.39",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20130510-110748396",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/10569,
    title ="Planktonic and sediment-associated aerobic methanotrophs in two seep systems along the North American margin",
    author = "Tavormina, Patricia L. and Ussler, William, III and Orphan, Victoria J.",
    journal = "Applied and Environmental Microbiology",
    volume = "74",
    number = "13",
    pages = "3985-3995",
    month = "July",
    year = "2008",
    
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:TAVaem08",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/11123,
    title ="Diverse syntrophic partnerships from deep-sea methane vents revealed by direct cell capture and metagenomics",
    author = "Pernthaler, Annelie and Dekas, Anne E. and Brown, C. Titus and Goffredi, Shana K. and Embaye, Tsegereda and Orphan, Victoria J.",
    journal = "Proceedings of the National Academy of Sciences of the United States of America",
    volume = "105",
    number = "19",
    pages = "7052-7057",
    month = "May",
    year = "2008",
    
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:PERpnas08",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/37639,
    title ="Temporal evolution of methane cycling and phylogenetic diversity of archaea in sediments from a deep-sea whale-fall in Monterey Canyon, California",
    author = "Goffredi, Shana K. and Wilpiszeski, Regina and Lee, Ray and Orphan, Victoria J.",
    journal = "ISME Journal",
    volume = "2",
    number = "2",
    pages = "204-220",
    month = "February",
    year = "2008",
    doi = "https://doi.org/10.1038/ismej.2007.103",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20130327-080517687",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/37640,
    title ="Methyl sulfides as intermediates in the anaerobic oxidation of methane",
    author = "Moran, James J. and Beal, Emily J. and Vrentas, Jennifer M. and Orphan, Victoria J. and Freeman, Katherine H. and House, Christopher H.",
    journal = "Environmental Microbiology",
    volume = "10",
    number = "1",
    pages = "162-173",
    month = "January",
    year = "2008",
    doi = "https://doi.org/10.1111/j.1462-2920.2007.01441.x",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20130327-081544064",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/37736,
    title ="Archaea, Methane, and Oases of the Deep",
    author = "Orphan, Victoria J. and House, Christopher H. and Goffredi, Shana K.",
    journal = "Nova Acta Leopoldina",
    volume = "96",
    number = "356",
    pages = "19-23",
    month = "January",
    year = "2008",
    
    
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20130403-085441691",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/36854,
    title ="Micron-scale resolution of sulfur cycling in a microbial mat",
    author = "Fike, David and Ussler, William and Eiler, John and Guan, Yunbin and Orphan, Victoria",
    journal = "Geochimica et Cosmochimica Acta",
    volume = "71",
    number = "15",
    pages = "A278",
    month = "August",
    year = "2007",
    doi = "https://doi.org/10.1016/j.gca.2007.06.015",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20130211-144010988",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/47447,
    title ="The ties that bind: Dynamics of syntrophic associations in marine methane seeps",
    author = "Orphan, Victoria J. and Pernthaler, Annelie and Dekas, Anne E. and Gammon, Crystal and House, Christopher H.",
    journal = "Geochimica et Cosmochimica Acta",
    volume = "71",
    number = "15, S",
    pages = "A743",
    month = "August",
    year = "2007",
    
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20140723-162327312",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/38165,
    title ="Authigenic carbonate formation at hydrocarbon seeps in continental margin sediments: A comparative study",
    author = "Naehr, Thomas H. and Eichhubl, Peter and Orphan, Victoria J. and Hovland, Martin and Paull, Charles K. and Ussler, William, III and Lorenson, Thomas D. and Greene, H. Gary",
    journal = "Deep-Sea Research. Part II, Topical Studies in Oceanography",
    volume = "54",
    number = "11-13",
    pages = "1268-1291",
    month = "June",
    year = "2007",
    doi = "https://doi.org/10.1016/j.dsr2.2007.04.010",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20130429-140926092",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/8287,
    title ="Consumption of Methane and CO_2 by Methanotrophic Microbial Mats from Gas Seeps of the Anoxic Black Sea",
    author = "Treude, Tina and Orphan, Victoria J. and Knittel, Katrin and Gieseke, Armin and House, Christopher H. and Boetius, Antje",
    journal = "Applied and Environmental Microbiology",
    volume = "73",
    number = "7",
    pages = "2271-2283",
    month = "April",
    year = "2007",
    
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:TREaem07",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/47446,
    title ="Linking molecular taxonomy with environmental geochemsitry in environments relevant to astrobiology: The anaerobic oxidation of methane in cold seeps & deeply buried marine sediments",
    author = "House, Christopher H. and Biddle, Jennifer F. and Lipp, Julius S. and Orphan, Victoria J. and McKeegan, Kevin D. and Hinrichs, Kai-Uwe",
    journal = "Origins of life and evolution of the biosphere",
    volume = "36",
    number = "3",
    pages = "314-315",
    month = "June",
    year = "2006",
    
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20140723-162327093",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/37710,
    title ="Evolutionary innovation: a bone-eating marine symbiosis",
    author = "Goffredi, Shana K. and Orphan, Victoria J. and Rouse, Greg W. and Jahnke, Linda and Embaye, Tsegeria and Turk, Kendra and Lee, Ray and Vrijenhoek, Robert C.",
    journal = "Environmental Microbiology",
    volume = "7",
    number = "9",
    pages = "1369-1378",
    month = "September",
    year = "2005",
    doi = "https://doi.org/10.1111/j.1462-2920.2005.00824.x",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20130402-081618805",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/37643,
    title ="Geological, geochemical, and microbiological heterogeneity of the seafloor around methane vents in the Eel River Basin, offshore California",
    author = "Orphan, V. J. and Ussler, W., III and Naehr, T. H. and House, C. H. and Hinrichs, K.-U. and Paull, C. K.",
    journal = "Chemical Geology",
    volume = "205",
    number = "3-4",
    pages = "265-289",
    month = "May",
    year = "2004",
    doi = "https://doi.org/10.1016/j.chemgeo.2003.12.035",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20130327-085250919",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/1596,
    title ="Novel Forms of Structural Integration between Microbes and a Hydrothermal Vent Gastropod from the Indian Ocean",
    author = "Goffredi, Shana K. and Warén, Anders and Orphan, Victoria J. and Van Dover, Cindy L. and Vrijenhoek, Robert C.",
    journal = "Applied and Environmental Microbiology",
    volume = "70",
    number = "5",
    pages = "3082-3090",
    month = "May",
    year = "2004",
    doi = "https://doi.org/10.1128/AEM.70.5.3082-3090.2004",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:GOFaem04",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/1595,
    title ="Growth and Methane Oxidation Rates of Anaerobic Methanotrophic Archaea in a Continuous-Flow Bioreactor",
    author = "Girguis, Peter R. and Orphan, Victoria J. and Hallam, Steven J. and DeLong, Edward F.",
    journal = "Applied and Environmental Microbiology",
    volume = "69",
    number = "9",
    pages = "5472-5482",
    month = "September",
    year = "2003",
    doi = "https://doi.org/10.1128/AEM.69.9.5472-5482.2003",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:GIRaem03",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/38036,
    title ="Geochemical Influence on Diversity and Microbial Processes in High Temperature Oil Reservoirs",
    author = "Orphan, V. J. and Goffredi, S. K. and DeLong, E. F. and Boles, J. R.",
    journal = "Geomicrobiology Journal",
    volume = "20",
    number = "4",
    pages = "295-311",
    month = "July",
    year = "2003",
    doi = "https://doi.org/10.1080/01490450303898",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20130419-103230121",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/47249,
    title ="Direct phylogenetic and isotopic evidence for multiple groups of archaea involved in the anaerobic oxidation of methane",
    author = "Orphan, V. J. and House, C. H. and Hinrichs, K.-U. and McKeegan, K. D. and DeLong, E. F.",
    journal = "Geochimica et Cosmochimica Acta",
    volume = "66",
    number = "S1",
    pages = "A571",
    month = "August",
    year = "2002",
    
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20140715-170201332",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/773,
    title ="Multiple archaeal groups mediate methane oxidation in anoxic cold seep sediments",
    author = "Orphan, Victoria J. and House, Christopher H. and Hinrichs, Kai-Uwe and McKeegan, Kevin D. and DeLong, Edward F.",
    journal = "Proceedings of the National Academy of Sciences of the United States of America",
    volume = "99",
    number = "11",
    pages = "7663-7668",
    month = "May",
    year = "2002",
    doi = "https://doi.org/10.1073/pnas.072210299",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:ORPpnas02",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/37841,
    title ="Methane-Consuming Archaea Revealed by Directly Coupled Isotopic and Phylogenetic Analysis",
    author = "Orphan, Victoria J. and House, Christopher H. and Hinrichs, Kai-Uwe and McKeegan, Kevin D. and DeLong, Edward F.",
    journal = "Science",
    volume = "293",
    number = "5529",
    pages = "484-487",
    month = "July",
    year = "2001",
    doi = "https://doi.org/10.1126/science.1061338",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20130410-080805831",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/1579,
    title ="Comparative Analysis of Methane-Oxidizing Archaea and Sulfate-Reducing Bacteria in Anoxic Marine Sediments",
    author = "Orphan, V. J. and Hinrichs, K.-U. and Ussler, W., III and Paull, C. K. and Taylor, L. T. and Sylva, S. P. and Hayes, J. M. and DeLong, E. F.",
    journal = "Applied and Environmental Microbiology",
    volume = "67",
    number = "4",
    pages = "1922-1934",
    month = "April",
    year = "2001",
    doi = "https://doi.org/10.1128/AEM.67.4.1922-1934.2001",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:ORPaem01",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/38166,
    title ="Molecular and isotopic analysis of anaerobic methane-oxidizing communities in marine sediments",
    author = "Hinrichs, Kai-Uwe and Summons, Roger E. and Orphan, Victoria and Sylva, Sean P. and Hayes, John M.",
    journal = "Organic Geochemistry",
    volume = "31",
    number = "12",
    pages = "1685-1701",
    month = "December",
    year = "2000",
    doi = "https://doi.org/10.1016/S0146-6380(00)00106-6",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20130429-141001775",
}
@article {CaltechAUTHORS_https://authors.library.caltech.edu/id/eprint/37641,
    title ="Culture-Dependent and Culture-Independent Characterization of Microbial Assemblages Associated with High-Temperature Petroleum Reservoirs",
    author = "Orphan, V. J. and Taylor, L. T. and Hafenbradl, D. and DeLong, E. F.",
    journal = "Applied and Environmental Microbiology",
    volume = "66",
    number = "2",
    pages = "700-711",
    month = "February",
    year = "2000",
    doi = "https://doi.org/10.1128/AEM.66.2.700-711.2000",
    
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20130327-083124041",
}