<h1>Newman, Dianne</h1> <h2>Combined from <a href="https://authors.library.caltech.edu">CaltechAUTHORS</a></h2> <ul> <li>Squyres, Georgia R and Newman, Dianne (2024) <a href="https://authors.library.caltech.edu/records/9try3-cyw51">Biofilms as more than the sum of their parts: lessons from developmental biology</a>; Current Opinion in Microbiology; Vol. 82; 102537; <a href="https://doi.org/10.1016/j.mib.2024.102537">10.1016/j.mib.2024.102537</a></li> <li>Ciemniecki, John A. and Ho, Chia-Lun, el al. (2024) <a href="https://authors.library.caltech.edu/records/f791y-k9a09">Mechanistic study of a low-power bacterial maintenance state using high-throughput electrochemistry</a>; Cell; Vol. 187; No. 24; 6882-6895.e8; <a href="https://doi.org/10.1016/j.cell.2024.09.042">10.1016/j.cell.2024.09.042</a></li> <li>Horak, Richard D. and Ciemniecki, John A., el al. (2024) <a href="https://authors.library.caltech.edu/records/2jjh1-b6827">Bioenergetic suppression by redox-active metabolites promotes antibiotic tolerance in Pseudomonas aeruginosa</a>; Proceedings of the National Academy of Sciences; Vol. 121; No. 46; e2406555121; <a href="https://doi.org/10.1073/pnas.2406555121">10.1073/pnas.2406555121</a></li> <li>Flamholz, Avi I. and Goldford, Joshua E., el al. (2024) <a href="https://authors.library.caltech.edu/records/2b7eq-e6f31">Annotation-free prediction of microbial dioxygen utilization</a>; mSystems; e00763-24; <a href="https://doi.org/10.1128/msystems.00763-24">10.1128/msystems.00763-24</a></li> <li>Zhang, Oumeng and Alcalde, Reinaldo E., el al. (2024) <a href="https://authors.library.caltech.edu/records/xb3nm-mp669">Investigating 3D microbial community dynamics of the rhizosphere using quantitative phase and fluorescence microscopy</a>; Proceedings of the National Academy of Sciences; Vol. 121; No. 33; e2403122121; <a href="https://doi.org/10.1073/pnas.2403122121">10.1073/pnas.2403122121</a></li> <li>Wang, Renée Z. and Lonergan, Zachery R., el al. (2024) <a href="https://authors.library.caltech.edu/records/etr6e-vc915">Widespread detoxifying NO reductases impart a distinct isotopic fingerprint on N₂O under anoxia</a>; Proceedings of the National Academy of Sciences; Vol. 121; No. 25; e2319960121; <a href="https://doi.org/10.1073/pnas.2319960121">10.1073/pnas.2319960121</a></li> <li>Kim, Jane H. and Dong, Julianna, el al. (2024) <a href="https://authors.library.caltech.edu/records/hery8-f9962">Pseudomonas aeruginosa Activates Quorum Sensing, Antioxidant Enzymes and Type VI Secretion in Response to Oxidative Stress to Initiate Biofilm Formation and Wound Chronicity</a>; Antioxidants; Vol. 13; No. 6; 655; PMCID PMC11200925; <a href="https://doi.org/10.3390/antiox13060655">10.3390/antiox13060655</a></li> <li>Tsypin, Lev M. Z. and Saunders, Scott H., el al. (2024) <a href="https://authors.library.caltech.edu/records/n3db2-81351">Genetically dissecting the electron transport chain of a soil bacterium reveals a generalizable mechanism for biological phenazine-1-carboxylic acid oxidation</a>; PLOS Genetics; 1011064; <a href="https://doi.org/10.1371/journal.pgen.1011064">10.1371/journal.pgen.1011064</a></li> <li>Magkiriadou, Sofia and Stepp, Willi L., el al. (2024) <a href="https://authors.library.caltech.edu/records/sedrt-1d729">Polyphosphate affects cytoplasmic and chromosomal dynamics in nitrogen-starved Pseudomonas aeruginosa</a>; Proceedings of the National Academy of Sciences; Vol. 121; No. 15; e2313004121; PMCID PMC11009631; <a href="https://doi.org/10.1073/pnas.2313004121">10.1073/pnas.2313004121</a></li> <li>Zhang, Irene H. and Borer, Benedict, el al. (2024) <a href="https://authors.library.caltech.edu/records/5ff0q-hg961">Uncultivated DPANN archaea are ubiquitous inhabitants of global oxygen-deficient zones with diverse metabolic potential</a>; mBio; e02918-23; <a href="https://doi.org/10.1128/mbio.02918-23">10.1128/mbio.02918-23</a></li> <li>Flamholz, Avi I. and Goyal, Akshit, el al. (2024) <a href="https://authors.library.caltech.edu/records/p94bf-gjw45">The proteome is a terminal electron acceptor</a>; PMCID PMC10862836; <a href="https://doi.org/10.1101/2024.01.31.578293">10.1101/2024.01.31.578293</a></li> <li>Kim, Jane H. and Spero, Melanie, el al. (2024) <a href="https://authors.library.caltech.edu/records/t7wf4-czj59">Targeting Anaerobic Respiration in Pseudomonas aeruginosa with Chlorate Improves Healing of Chronic Wounds</a>; Advances in Wound Care; Vol. 13; No. 2; 53-69; <a href="https://doi.org/10.1089/wound.2023.0036">10.1089/wound.2023.0036</a></li> <li>Larsson, Elin M. and Murray, Richard M., el al. (2024) <a href="https://authors.library.caltech.edu/records/wcnwq-0mw52">Engineering the Soil Bacterium Pseudomonas synxantha 2–79 into a Ratiometric Bioreporter for Phosphorus Limitation</a>; ACS Synthetic Biology; Vol. 13; No. 1; 384-393; <a href="https://doi.org/10.1021/acssynbio.3c00642">10.1021/acssynbio.3c00642</a></li> <li>Wang, Renée Z. and Lonergan, Zachery R., el al. (2023) <a href="https://authors.library.caltech.edu/records/gb86g-qpm69">Widespread detoxifying NO reductases impart a distinct isotopic fingerprint on N₂O under anoxia</a>; PMCID PMC10592819; <a href="https://doi.org/10.1101/2023.10.13.562248">10.1101/2023.10.13.562248</a></li> <li>Thalhammer, Korbinian O. and Newman, Dianne K. (2023) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20230615-473807000.4">A phenazine-inspired framework for identifying biological functions of microbial redox-active metabolites</a>; Current Opinion in Chemical Biology; Vol. 75; Art. No. 102320; <a href="https://doi.org/10.1016/j.cbpa.2023.102320">10.1016/j.cbpa.2023.102320</a></li> <li>Jiménez Otero, Fernanda and Newman, Dianne K., el al. (2023) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20230615-473786000.3">Pyocyanin-dependent electrochemical inhibition of Pseudomonas aeruginosa biofilms is synergistic with antibiotic treatment</a>; mBio; Vol. 14; No. 4; e0070223; PMCID PMC10470778; <a href="https://doi.org/10.1128/mbio.00702-23">10.1128/mbio.00702-23</a></li> <li>Ciemniecki, John A. and Newman, Dianne K. (2023) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20230328-708572000.63">NADH dehydrogenases are the predominant phenazine reductases in the electron transport chain of Pseudomonas aeruginosa</a>; Molecular Microbiology; Vol. 119; No. 5; 560-573; PMCID PMC11129870; <a href="https://doi.org/10.1111/mmi.15049">10.1111/mmi.15049</a></li> <li>McRose, Darcy L. and Liang, Jinyang, el al. (2023) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20230602-251523000.6">The chemical ecology of coumarins and phenazines affects iron acquisition by pseudomonads</a>; Proceedings of the National Academy of Sciences of the United States of America; Vol. 120; No. 14; Art. No. e2217951120; PMCID PMC10083548; <a href="https://doi.org/10.1073/pnas.2217951120">10.1073/pnas.2217951120</a></li> <li>Flamholz, Avi I. and Saccomano, Samuel, el al. (2022) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20221117-155838300.12">Optical O₂ Sensors Also Respond to Redox Active Molecules Commonly Secreted by Bacteria</a>; mBio; Vol. 13; No. 6; Art. No. e0207622; PMCID PMC9765510; <a href="https://doi.org/10.1128/mbio.02076-22">10.1128/mbio.02076-22</a></li> <li>Wilbert, Steven A. and Newman, Dianne K. (2022) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20230203-893210800.2">The contrasting roles of nitric oxide drive microbial community organization as a function of oxygen presence</a>; Current Biology; Vol. 32; No. 24; 5221-5234.e4; PMCID PMC9772256; <a href="https://doi.org/10.1016/j.cub.2022.10.008">10.1016/j.cub.2022.10.008</a></li> <li>Spero, Melanie A. and Jones, Jeff, el al. (2022) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20220808-223822000">Mechanisms of chlorate toxicity and resistance in Pseudomonas aeruginosa</a>; Molecular Microbiology; Vol. 118; No. 4; 321-335; PMCID PMC9589919; <a href="https://doi.org/10.1111/mmi.14972">10.1111/mmi.14972</a></li> <li>Jiménez Otero, Fernanda and Newman, Dianne K., el al. (2022) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20230322-367168000.14">Electrochemical disruption of extracellular electron transfer inhibits Pseudomonas aeruginosa cell survival within biofilms and is synergistic with antibiotic treatment</a>; <a href="https://doi.org/10.1101/2022.09.15.508205">10.1101/2022.09.15.508205</a></li> <li>Flamholz, Avi I. and Saccomano, Samuel, el al. (2022) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20220810-751722000">Optical O₂ sensors also respond to redox active molecules commonly secreted by bacteria</a>; <a href="https://doi.org/10.1101/2022.08.08.503264">10.1101/2022.08.08.503264</a></li> <li>Tumasyan, A. and Adam, W., el al. (2022) <a href="https://authors.library.caltech.edu/records/hddm6-jdn37">Search for Resonances Decaying to Three W Bosons in Proton-Proton Collisions at √s=13TeV</a>; Physical Review Letters; Vol. 129; No. 2; 021802; <a href="https://doi.org/10.1103/physrevlett.129.021802">10.1103/physrevlett.129.021802</a></li> <li>Tookmanian, Elise and Junghans, Lisa, el al. (2022) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20210902-193802546">Hopanoids Confer Robustness to Physicochemical Variability in the Niche of the Plant Symbiont Bradyrhizobium diazoefficiens</a>; Journal of Bacteriology; Vol. 204; No. 7; jb.00442-21; PMCID PMC9295548; <a href="https://doi.org/10.1128/jb.00442-21">10.1128/jb.00442-21</a></li> <li>Livingston, Jadzia and Spero, Melanie A., el al. (2022) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20220315-626233000">Visualization of mRNA Expression in Pseudomonas aeruginosa Aggregates Reveals Spatial Patterns of Fermentative and Denitrifying Metabolism</a>; Applied and Environmental Microbiology; Vol. 88; No. 11; Art. No. aem.00439-22; <a href="https://doi.org/10.1128/aem.00439-22">10.1128/aem.00439-22</a></li> <li>Meirelles, Lucas A. and Newman, Dianne K. (2022) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20211203-174950532">Phenazines and toxoflavin act as interspecies modulators of resilience to diverse antibiotics</a>; Molecular Microbiology; Vol. 117; No. 6; 1384-1404; PMCID PMC10249331; <a href="https://doi.org/10.1111/mmi.14915">10.1111/mmi.14915</a></li> <li>Flamholz, Avi I. and Newman, Dianne K. (2022) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20220318-882662036">Microbial communities: The metabolic rate is the trait</a>; Current Biology; Vol. 32; No. 5; R215-R218; <a href="https://doi.org/10.1016/j.cub.2022.02.002">10.1016/j.cub.2022.02.002</a></li> <li>Perry, Elena K. and Meirelles, Lucas A., el al. (2022) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20210917-143518027">From the soil to the clinic: the impact of microbial secondary metabolites on antibiotic tolerance and resistance</a>; Nature Reviews Microbiology; Vol. 20; No. 3; 129-142; PMCID PMC8857043; <a href="https://doi.org/10.1038/s41579-021-00620-w">10.1038/s41579-021-00620-w</a></li> <li>Perry, Elena K. and Newman, Dianne K. (2022) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20211129-175740276">Prevalence and Correlates of Phenazine Resistance in Culturable Bacteria from a Dryland Wheat Field</a>; Applied and Environmental Microbiology; Vol. 88; No. 6; Art. No. e02320-21; PMCID PMC8939311; <a href="https://doi.org/10.1128/aem.02320-21">10.1128/aem.02320-21</a></li> <li>Dahlstrom, Kurt M. and Newman, Dianne K. (2022) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20211208-560304000">Soil bacteria protect fungi from phenazines by acting as toxin sponges</a>; Current Biology; Vol. 32; No. 2; 275-288; <a href="https://doi.org/10.1016/j.cub.2021.11.002">10.1016/j.cub.2021.11.002</a></li> <li>Magkiriadou, S. and Habel, A., el al. (2021) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20220104-461622500">Polyphosphate affects cytoplasmic and chromosomal dynamics in nitrogen-starved Pseudomonas aeruginosa</a>; <a href="https://doi.org/10.1101/2021.12.23.473106">10.1101/2021.12.23.473106</a></li> <li>Wilbert, Steven A. and Newman, Dianne K. (2021) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20211210-238484000">The contrasting roles of nitric oxide drive microbial community organization as a function of oxygen presence</a>; <a href="https://doi.org/10.1101/2021.12.09.472001">10.1101/2021.12.09.472001</a></li> <li>O'Toole, George A. and Crabbé, Aurélie, el al. (2021) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20211116-212551206">Model Systems to Study the Chronic, Polymicrobial Infections in Cystic Fibrosis: Current Approaches and Exploring Future Directions</a>; mBio; Vol. 12; No. 5; Art. No. mBio.01763-21; PMCID PMC8546538; <a href="https://doi.org/10.1128/mbio.01763-21">10.1128/mbio.01763-21</a></li> <li>Dar, Daniel and Dar, Nina, el al. (2021) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20210226-074209469">Spatial transcriptomics of planktonic and sessile bacterial populations at single-cell resolution</a>; Science; Vol. 373; No. 6556; Art. No. eabi4882; PMCID PMC8454218; <a href="https://doi.org/10.1126/science.abi4882">10.1126/science.abi4882</a></li> <li>Jiménez Otero, Fernanda and Chadwick, Grayson L., el al. (2021) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20210714-151655967">Evidence of a Streamlined Extracellular Electron Transfer Pathway from Biofilm Structure, Metabolic Stratification, and Long-Range Electron Transfer Parameters</a>; Applied and Environmental Microbiology; Vol. 87; No. 17; Art. No. AEM.00706-21; PMCID PMC8357294; <a href="https://doi.org/10.1128/aem.00706-21">10.1128/aem.00706-21</a></li> <li>Tsypin, Lev M. and Newman, Dianne K. (2021) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20210607-115053770">Nitrate Reduction Stimulates and Is Stimulated by Phenazine-1-Carboxylic Acid Oxidation by Citrobacter portucalensis MBL</a>; mBio; Vol. 12; No. 4; Art. No. e02265-21; <a href="https://doi.org/10.1128/mBio.02265-21">10.1128/mBio.02265-21</a></li> <li>Tookmanian, Elise M. and Belin, Brittany J., el al. (2021) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20210518-093548632">The role of hopanoids in fortifying rhizobia against a changing climate</a>; Environmental Microbiology; Vol. 23; No. 6; 2906-2918; <a href="https://doi.org/10.1111/1462-2920.15594">10.1111/1462-2920.15594</a></li> <li>Kim, Jane H. and Spero, Melanie, el al. (2021) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20210603-082221478">Chlorate And Antibiotic Treatment Dismantle Pseudomonas Aeruginosa Biofilm And Lead To Healing Of Chronic Wounds</a>; Wound Repair and Regeneration; Vol. 29; No. 3; A44-A45; <a href="https://doi.org/10.1111/wrr.12921">10.1111/wrr.12921</a></li> <li>Dahlstrom, Kurt M. and Newman, Dianne K. (2021) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20210419-152102811">Paraburkholderia edwinii protects Aspergillus sp. from phenazines by acting as a toxin sponge</a>; <a href="https://doi.org/10.1101/2021.03.28.437412">10.1101/2021.03.28.437412</a></li> <li>VanDrisse, Chelsey M. and Lipsh-Sokolik, Rosalie, el al. (2021) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20210316-072135929">Computationally designed pyocyanin demethylase acts synergistically with tobramycin to kill recalcitrant Pseudomonas aeruginosa biofilms</a>; Proceedings of the National Academy of Sciences of the United States of America; Vol. 118; No. 12; Art. No. e2022012118; PMCID PMC8000102; <a href="https://doi.org/10.1073/pnas.2022012118">10.1073/pnas.2022012118</a></li> <li>Piddini, Eugenia and Shalek, Alex K., el al. (2021) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20210503-104005111">How are methodological developments enabling insights into cell behavior in cellular communities?</a>; Cell Systems; Vol. 12; No. 3; 207-209; <a href="https://doi.org/10.1016/j.cels.2021.02.005">10.1016/j.cels.2021.02.005</a></li> <li>Meirelles, Lucas A. and Perry, Elena K., el al. (2021) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20200421-132753787">Bacterial defenses against a natural antibiotic promote collateral resilience to clinical antibiotics</a>; PLoS Biology; Vol. 19; No. 3; Art. No. e3001093; <a href="https://doi.org/10.1371/journal.pbio.3001093">10.1371/journal.pbio.3001093</a></li> <li>McRose, Darcy L. and Newman, Dianne K. (2021) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20210304-154532731">Redox-active antibiotics enhance phosphorus bioavailability</a>; Science; Vol. 371; No. 6533; 1033-1037; PMCID PMC8051141; <a href="https://doi.org/10.1126/science.abd1515">10.1126/science.abd1515</a></li> <li>Newman, Dianne K. and Costa, Kyle C. (2021) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20211029-213538184">Phenazine degrading agents and related compositions, methods and systems for interfering with viability of bacteria</a></li> <li>Mickol, Rebecca L. and Louyakis, Artemis S., el al. (2021) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20210114-164619982">Draft Genome Sequence of the Free-Living, Iridescent Bacterium Tenacibaculum mesophilum Strain ECR</a>; Microbiology Resource Announcements; Vol. 10; No. 1; Art. No. e01302-20; <a href="https://doi.org/10.1128/mra.01302-20">10.1128/mra.01302-20</a></li> <li>Tsypin, Lev M. and Newman, Dianne K. (2020) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20201124-104632686">Bidirectional redox cycling of phenazine-1-carboxylic acid by Citrobacter portucalensis MBL drives increased nitrate reduction</a>; <a href="https://doi.org/10.1101/2020.11.23.395335">10.1101/2020.11.23.395335</a></li> <li>Dahlstrom, Kurt M. and McRose, Darcy L., el al. (2020) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20201006-131015350">Keystone metabolites of crop rhizosphere microbiomes</a>; Current Biology; Vol. 30; No. 19; R1131-R1137; PMCID PMC8059773; <a href="https://doi.org/10.1016/j.cub.2020.08.005">10.1016/j.cub.2020.08.005</a></li> <li>Dar, Daniel and Thomashow, Linda S., el al. (2020) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20200609-075446759">Global landscape of phenazine biosynthesis and biodegradation reveals species-specific colonization patterns in agricultural soils and crop microbiomes</a>; eLife; Vol. 2020; No. 9; Art. No. e59726; <a href="https://doi.org/10.7554/eLife.59726">10.7554/eLife.59726</a></li> <li>Saunders, Scott H. and Tse, Edmund C. M., el al. (2020) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20191213-144717393">Extracellular DNA Promotes Efficient Extracellular Electron Transfer by Pyocyanin in Pseudomonas aeruginosa Biofilms</a>; Cell; Vol. 182; No. 4; 919-932; PMCID PMC7457544; <a href="https://doi.org/10.1016/j.cell.2020.07.006">10.1016/j.cell.2020.07.006</a></li> <li>Tsypin, Lev M. and Saunders, Scott H., el al. (2020) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20200806-153947593">Draft Genome Sequence of the Redox-Active Enteric Bacterium Citrobacter portucalensis Strain MBL</a>; Microbiology Resource Announcements; Vol. 9; No. 32; Art. No. e00695-20; PMCID PMC7409854; <a href="https://doi.org/10.1128/mra.00695-20">10.1128/mra.00695-20</a></li> <li>Ciemniecki, John A. and Newman, Dianne K. (2020) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20200219-111358713">The potential for redox-active metabolites (RAMs) to enhance or unlock anaerobic survival metabolisms in aerobes</a>; Journal of Bacteriology; Vol. 202; No. 11; Art. No. e00797-19; PMCID PMC7221258; <a href="https://doi.org/10.1128/jb.00797-19">10.1128/jb.00797-19</a></li> <li>Gallego-Hernandez, A. L. and DePas, W. H., el al. (2020) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20200504-083728290">Upregulation of virulence genes promotes Vibrio cholerae biofilm hyperinfectivity</a>; Proceedings of the National Academy of Sciences of the United States of America; Vol. 117; No. 20; 11010-11017; PMCID PMC7245069; <a href="https://doi.org/10.1073/pnas.1916571117">10.1073/pnas.1916571117</a></li> <li>Basta, David W. and Angeles-Albores, David, el al. (2020) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20200206-163326208">Heat-shock proteases promote survival of Pseudomonas aeruginosa during growth arrest</a>; Proceedings of the National Academy of Sciences of the United States of America; Vol. 117; No. 8; 4358-4367; PMCID PMC7049150; <a href="https://doi.org/10.1073/pnas.1912082117">10.1073/pnas.1912082117</a></li> <li>Glasser, Nathaniel R. and Hunter, Ryan C., el al. (2019) <a href="https://resolver.caltech.edu/CaltechAUTHORS:20181128-093526010">Refinement of metabolite detection in cystic fibrosis sputum reveals heme correlates with lung function decline</a>; PLoS ONE; Vol. 14; No. 12; Art. No. e0226578; PMCID PMC6919587; <a href="https://doi.org/10.1371/journal.pone.0226578">10.1371/journal.pone.0226578</a></li> <li>Jorth, Peter and Spero, Melanie A., el al. 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