- Zhang, Irene H.; Borer, Benedict; et el. (2024) Uncultivated
DPANN archaea are ubiquitous inhabitants of global oxygen-deficient
zones with diverse metabolic potential; mBio; e02918-23; 10.1128/mbio.02918-23
- Kim, Jane H.; Spero, Melanie; et el. (2024) Targeting
Anaerobic Respiration in Pseudomonas aeruginosa with Chlorate Improves
Healing of Chronic Wounds; Advances in Wound Care; Vol. 13; No. 2;
53-69; 10.1089/wound.2023.0036
- Larsson, Elin M.; Murray, Richard M.; et el. (2024) Engineering
the Soil Bacterium Pseudomonas synxantha 2–79 into a Ratiometric
Bioreporter for Phosphorus Limitation; ACS Synthetic Biology; 10.1021/acssynbio.3c00642
- Thalhammer, Korbinian O. and Newman, Dianne K. (2023) A
phenazine-inspired framework for identifying biological functions of
microbial redox-active metabolites; Current Opinion in Chemical
Biology; Vol. 75; Art. No. 102320; 10.1016/j.cbpa.2023.102320
- Jiménez Otero, Fernanda; Newman, Dianne K.; et el. (2023) Pyocyanin-dependent
electrochemical inhibition of Pseudomonas aeruginosa biofilms is
synergistic with antibiotic treatment; mBio; Vol. 14; No. 4;
e0070223; PMCID PMC10470778; 10.1128/mbio.00702-23
- Ciemniecki, John A. and Newman, Dianne K. (2023) NADH
dehydrogenases are the predominant phenazine reductases in the electron
transport chain of Pseudomonas aeruginosa; Molecular Microbiology;
Vol. 119; No. 5; 560-573; 10.1111/mmi.15049
- McRose, Darcy L.; Liang, Jinyang; et el. (2023) The
chemical ecology of coumarins and phenazines affects iron acquisition by
pseudomonads; Proceedings of the National Academy of Sciences of the
United States of America; Vol. 120; No. 14; Art. No. e2217951120; PMCID
PMC10083548; 10.1073/pnas.2217951120
- Flamholz, Avi I.; Saccomano, Samuel; et el. (2022) Optical
O₂ Sensors Also Respond to Redox Active Molecules Commonly Secreted by
Bacteria; mBio; Vol. 13; No. 6; Art. No. e0207622; PMCID PMC9765510;
10.1128/mbio.02076-22
- Wilbert, Steven A. and Newman, Dianne K. (2022) The
contrasting roles of nitric oxide drive microbial community organization
as a function of oxygen presence; Current Biology; Vol. 32; No. 24;
5221-5234.e4; PMCID PMC9772256; 10.1016/j.cub.2022.10.008
- Wilbert, Steven A. and Newman, Dianne K. (2022) The
contrasting roles of nitric oxide drive microbial community organization
as a function of oxygen presence; Current Biology; Vol. 32; No. 24;
5221-5234.e4; PMCID PMC9772256; 10.1016/j.cub.2022.10.008
- Spero, Melanie A.; Jones, Jeff; et el. (2022) Mechanisms
of chlorate toxicity and resistance in Pseudomonas aeruginosa;
Molecular Microbiology; Vol. 118; No. 4; 321-335; PMCID PMC9589919; 10.1111/mmi.14972
- Tookmanian, Elise; Junghans, Lisa; et el. (2022) Hopanoids
Confer Robustness to Physicochemical Variability in the Niche of the
Plant Symbiont Bradyrhizobium diazoefficiens; Journal of
Bacteriology; Vol. 204; No. 7; jb.00442-21; PMCID PMC9295548; 10.1128/jb.00442-21
- Meirelles, Lucas A. and Newman, Dianne K. (2022) Phenazines
and toxoflavin act as interspecies modulators of resilience to diverse
antibiotics; Molecular Microbiology; Vol. 117; No. 6; 1384-1404;
PMCID PMC10249331; 10.1111/mmi.14915
- Livingston, Jadzia; Spero, Melanie A.; et el. (2022) Visualization
of mRNA Expression in Pseudomonas aeruginosa Aggregates Reveals Spatial
Patterns of Fermentative and Denitrifying Metabolism; Applied and
Environmental Microbiology; Vol. 88; No. 11; Art. No. aem.00439-22; 10.1128/aem.00439-22
- Flamholz, Avi I. and Newman, Dianne K. (2022) Microbial
communities: The metabolic rate is the trait; Current Biology; Vol.
32; No. 5; R215-R218; 10.1016/j.cub.2022.02.002
- Perry, Elena K.; Meirelles, Lucas A.; et el. (2022) From
the soil to the clinic: the impact of microbial secondary metabolites on
antibiotic tolerance and resistance; Nature Reviews Microbiology;
Vol. 20; No. 3; 129-142; PMCID PMC8857043; 10.1038/s41579-021-00620-w
- Perry, Elena K. and Newman, Dianne K. (2022) Prevalence
and Correlates of Phenazine Resistance in Culturable Bacteria from a
Dryland Wheat Field; Applied and Environmental Microbiology; Vol.
88; No. 6; Art. No. e02320-21; PMCID PMC8939311; 10.1128/aem.02320-21
- Dahlstrom, Kurt M. and Newman, Dianne K. (2022) Soil
bacteria protect fungi from phenazines by acting as toxin sponges;
Current Biology; Vol. 32; No. 2; 275-288; 10.1016/j.cub.2021.11.002
- O’Toole, George A.; Crabbé, Aurélie; et el. (2021) Model
Systems to Study the Chronic, Polymicrobial Infections in Cystic
Fibrosis: Current Approaches and Exploring Future Directions; mBio;
Vol. 12; No. 5; Art. No. mBio.01763-21; PMCID PMC8546538; 10.1128/mbio.01763-21
- Dar, Daniel; Dar, Nina; et el. (2021) Spatial
transcriptomics of planktonic and sessile bacterial populations at
single-cell resolution; Science; Vol. 373; No. 6556; Art.
No. eabi4882; PMCID PMC8454218; 10.1126/science.abi4882
- Jiménez Otero, Fernanda; Chadwick, Grayson L.; et el. (2021) Evidence
of a Streamlined Extracellular Electron Transfer Pathway from Biofilm
Structure, Metabolic Stratification, and Long-Range Electron Transfer
Parameters; Applied and Environmental Microbiology; Vol. 87; No. 17;
Art. No. AEM.00706-21; PMCID PMC8357294; 10.1128/aem.00706-21
- Tsypin, Lev M. and Newman, Dianne K. (2021) Nitrate
Reduction Stimulates and Is Stimulated by Phenazine-1-Carboxylic Acid
Oxidation by Citrobacter portucalensis MBL; mBio; Vol. 12; No. 4;
Art. No. e02265-21; 10.1128/mBio.02265-21
- Tookmanian, Elise M.; Belin, Brittany J.; et el. (2021) The
role of hopanoids in fortifying rhizobia against a changing climate;
Environmental Microbiology; Vol. 23; No. 6; 2906-2918; 10.1111/1462-2920.15594
- Kim, Jane H.; Spero, Melanie; et el. (2021) Chlorate
And Antibiotic Treatment Dismantle Pseudomonas Aeruginosa Biofilm And
Lead To Healing Of Chronic Wounds; Wound Repair and Regeneration;
Vol. 29; No. 3; A44-A45; 10.1111/wrr.12921
- VanDrisse, Chelsey M.; Lipsh-Sokolik, Rosalie; et el. (2021) Computationally
designed pyocyanin demethylase acts synergistically with tobramycin to
kill recalcitrant Pseudomonas aeruginosa biofilms; Proceedings of
the National Academy of Sciences of the United States of America; Vol.
118; No. 12; Art. No. e2022012118; PMCID PMC8000102; 10.1073/pnas.2022012118
- Piddini, Eugenia; Shalek, Alex K.; et el. (2021) How
are methodological developments enabling insights into cell behavior in
cellular communities?; Cell Systems; Vol. 12; No. 3; 207-209; 10.1016/j.cels.2021.02.005
- Meirelles, Lucas A.; Perry, Elena K.; et el. (2021) Bacterial
defenses against a natural antibiotic promote collateral resilience to
clinical antibiotics; PLoS Biology; Vol. 19; No. 3; Art.
No. e3001093; 10.1371/journal.pbio.3001093
- McRose, Darcy L. and Newman, Dianne K. (2021) Redox-active
antibiotics enhance phosphorus bioavailability; Science; Vol. 371;
No. 6533; 1033-1037; PMCID PMC8051141; 10.1126/science.abd1515
- Mickol, Rebecca L.; Louyakis, Artemis S.; et el. (2021) Draft
Genome Sequence of the Free-Living, Iridescent Bacterium Tenacibaculum
mesophilum Strain ECR; Microbiology Resource Announcements; Vol. 10;
No. 1; Art. No. e01302-20; 10.1128/mra.01302-20
- Dahlstrom, Kurt M.; McRose, Darcy L.; et el. (2020) Keystone
metabolites of crop rhizosphere microbiomes; Current Biology; Vol.
30; No. 19; R1131-R1137; PMCID PMC8059773; 10.1016/j.cub.2020.08.005
- Dar, Daniel; Thomashow, Linda S.; et el. (2020) Global
landscape of phenazine biosynthesis and biodegradation reveals
species-specific colonization patterns in agricultural soils and crop
microbiomes; eLife; Vol. 2020; No. 9; Art. No. e59726; 10.7554/eLife.59726
- Saunders, Scott H.; Tse, Edmund C. M.; et el. (2020) Extracellular
DNA Promotes Efficient Extracellular Electron Transfer by Pyocyanin in
Pseudomonas aeruginosa Biofilms; Cell; Vol. 182; No. 4; 919-932;
PMCID PMC7457544; 10.1016/j.cell.2020.07.006
- Tsypin, Lev M.; Saunders, Scott H.; et el. (2020) Draft
Genome Sequence of the Redox-Active Enteric Bacterium Citrobacter
portucalensis Strain MBL; Microbiology Resource Announcements; Vol.
9; No. 32; Art. No. e00695-20; PMCID PMC7409854; 10.1128/mra.00695-20
- Ciemniecki, John A. and Newman, Dianne K. (2020) The
potential for redox-active metabolites (RAMs) to enhance or unlock
anaerobic survival metabolisms in aerobes; Journal of Bacteriology;
Vol. 202; No. 11; Art. No. e00797-19; PMCID PMC7221258; 10.1128/jb.00797-19
- Gallego-Hernandez, A. L.; DePas, W. H.; et el. (2020) Upregulation
of virulence genes promotes Vibrio cholerae biofilm
hyperinfectivity; Proceedings of the National Academy of Sciences of
the United States of America; Vol. 117; No. 20; 11010-11017; PMCID
PMC7245069; 10.1073/pnas.1916571117
- Basta, David W.; Angeles-Albores, David; et el. (2020) Heat-shock
proteases promote survival of Pseudomonas aeruginosa during growth
arrest; Proceedings of the National Academy of Sciences of the
United States of America; Vol. 117; No. 8; 4358-4367; PMCID PMC7049150;
10.1073/pnas.1912082117
- Glasser, Nathaniel R.; Hunter, Ryan C.; et el. (2019) Refinement
of metabolite detection in cystic fibrosis sputum reveals heme
correlates with lung function decline; PLoS ONE; Vol. 14; No. 12;
Art. No. e0226578; PMCID PMC6919587; 10.1371/journal.pone.0226578
- Jorth, Peter; Spero, Melanie A.; et el. (2019) Quantitative
Visualization of Gene Expression in Mucoid and Nonmucoid Pseudomonas
aeruginosa Aggregates Reveals Localized Peak Expression of Alginate in
the Hypoxic Zone; mBio; Vol. 10; No. 6; Art. No. e02622-19; PMCID
PMC6918079; 10.1128/mbio.02622-19
- Spero, M. A.; Silveira, C. B.; et el. (2019) Chlorate’s
Potential as a Pro-Drug for Killing Antibiotic-Tolerant Pathogens in the
Cystic Fibrosis Lung; Pediatric Pulmonology; Vol. 54; No. S2; S281;
10.1002/ppul.22495
- Belin, Brittany J.; Tookmanian, Elise T.; et el. (2019) Extended
hopanoid loss reduces bacterial motility and surface attachment, and
leads to heterogeneity in root nodule growth kinetics in a
Bradyrhizobium-Aeschynomene symbiosis; Molecular Plant-Microbe
Interactions; Vol. 32; No. 10; 1415-1428; 10.1094/MPMI-04-19-0111-R
- DePas, W.; Bergkessel, M.; et el. (2019) Nontuberculous
Mycobacterial Aggregation is Regulated by C:N Balance; Pediatric
Pulmonology; Vol. 54; No. S2; S310; 10.1002/ppul.22495
- Ericson, Charles F.; Eisenstein, Fabian; et el. (2019) A
contractile injection system stimulates tubeworm metamorphosis by
translocating a proteinaceous effector; eLife; Vol. 8; Art.
No. e46845; PMCID PMC6748791; 10.7554/elife.46845
- Bergkessel, Megan; Babin, Brett M.; et el. (2019) The
dormancy-specific regulator, SutA, is intrinsically disordered and
modulates transcription initiation in Pseudomonas aeruginosa;
Molecular Microbiology; Vol. 112; No. 3; 992-1009; PMCID PMC6736744; 10.1111/mmi.14337
- DePas, William H.; Bergkessel, Megan; et el. (2019) Aggregation
of nontuberculous mycobacteria is regulated by carbon:nitrogen
balance; mBio; Vol. 10; No. 4; Art. No. e01715-19; PMCID PMC6692514;
10.1128/mBio.01715-19
- Perry, Elena K. and Newman, Dianne K. (2019) The
transcription factors ActR and SoxR differentially affect the phenazine
tolerance of Agrobacterium tumefaciens; Molecular Microbiology; Vol.
112; No. 1; 199-218; PMCID PMC6615960; 10.1111/mmi.14263
- Kee, H. Lynn; Mikheyeva, Irina V.; et el. (2019) Draft
Genome Sequence of the Iridescent Marine Bacterium Tenacibaculum
discolor Strain IMLK18; Microbiology Resource Announcements; Vol. 8;
No. 5; Art. No. e01683-18; PMCID PMC6357648; 10.1128/mra.01683-18
- Neubauer, Cajetan; Sessions, Alex L.; et el. (2018) Towards
measuring growth rates of pathogens during infections by D_2O-labeling
lipidomics; Rapid Communications in Mass Spectrometry; Vol. 32;
No. 24; 2129-2140; 10.1002/rcm.8288
- Meirelles, Lucas A. and Newman, Dianne K. (2018) Both
toxic and beneficial effects of pyocyanin contribute to the lifecycle of
Pseudomonas aeruginosa; Molecular Microbiology; Vol. 110; No. 6;
995-1010; PMCID PMC6281804; 10.1111/mmi.14132
- Neubauer, Cajetan; Kasi, Ajay S.; et el. (2018) Refining
the Application of Microbial Lipids as Tracers of Staphylococcus aureus
Growth Rates in Cystic Fibrosis Sputum; Journal of Bacteriology;
Vol. 200; No. 24; Art. No. e00365-18; PMCID PMC6256016; 10.1128/jb.00365-18
- Saunders, Scott H. and Newman, Dianne K. (2018) Extracellular
Electron Transfer Transcends Microbe-Mineral Interactions; Cell Host
& Microbe; Vol. 24; No. 5; 611-613; 10.1016/j.chom.2018.10.018
- Neubauer, Cajetan; Sweredoski, Michael J.; et el. (2018) Scanning
the isotopic structure of molecules by tandem mass spectrometry;
International Journal of Mass Spectrometry; Vol. 434; 276-286; 10.1016/j.ijms.2018.08.001
- Spero, Melanie A. and Newman, Dianne K. (2018) Chlorate
Specifically Targets Oxidant-Starved, Antibiotic-Tolerant Populations of
Pseudomonas aeruginosa Biofilms; mBio; Vol. 9; No. 5; Art.
No. e01400-18; PMCID PMC6156191; 10.1128/mbio.01400-18
- Glasser, Nathaniel R.; Oyala, Paul H.; et el. (2018) Structural
and mechanistic analysis of the arsenate respiratory reductase provides
insight into environmental arsenic transformations; Proceedings of
the National Academy of Sciences of the United States of America; Vol.
115; No. 37; E8614-E8623; PMCID PMC6140538; 10.1073/pnas.1807984115
- Newman, Dianne K. (2018) A
personal tribute to Terry Beveridge; Canadian Journal of
Microbiology; Vol. 64; No. 9; ix-xi; 10.1139/cjm-2017-0515
- Jorth, P.; Spero, M. A.; et el. (2018) In
situ gene expression analysis of mucoid P. aeruginosa biofilms suggests
that alginate expression is restricted to microaerobic regions of the
biofilm; Pediatric Pulmonology; Vol. 53; No. S2; Art. No. 462; 10.1002/ppul.24152
- Zhalnina, Kateryna; Zengler, Karsten; et el. (2018) Need
for Laboratory Ecosystems To Unravel the Structures and Functions of
Soil Microbial Communities Mediated by Chemistry; mBio; Vol. 9;
No. 4; Art. No. e01175-18; PMCID PMC6050955; 10.1128/mBio.01175-18
- Belin, Brittany J.; Busset, Nicolas; et el. (2018) Hopanoid
lipids: from membranes to plant–bacteria interactions; Nature
Reviews Microbiology; Vol. 16; No. 5; 304-315; PMCID PMC6087623; 10.1038/nrmicro.2017.173
- Faure, E.; Jorth, P.; et el. (2018) Intracellular
Persistence of Pseudomonas Aeruginosa in Airway Epithelial Cells and in
Cystic Fibrosis Lung; American Journal of Respiratory and Critical
Care Medicine; Vol. 197; Art. No. A6262
- Costa, Kyle C.; Moskatel, Leon S.; et el. (2018) PhdA
catalyzes the first step of phenazine-1-carboxylic acid degradation in
Mycobacterium fortuitum; Journal of Bacteriology; Vol. 200; No. 10;
Art. No. e00763-17; PMCID PMC5915785; 10.1128/JB.00763-17
- Saunders, Scott H.; Yates, Matthew D.; et el. (2018) Probing
Phenazine Electron Transfer and Retention in Pseudomonas Aeruginosa
Biofilms; Biophysical Journal; Vol. 114; No. 3; 28a; 10.1016/j.bpj.2017.11.198
- Basta, David W.; Bergkessel, Megan; et el. (2017) Identification
of Fitness Determinants during Energy-Limited Growth Arrest in
Pseudomonas aeruginosa; mBio; Vol. 8; No. 6; Art. No. e01170; PMCID
PMC5705914; 10.1128/mBio.01170-17
- Babin, Brett M.; Atangcho, Lydia; et el. (2017) Selective
Proteomic Analysis of Antibiotic-Tolerant Cellular Subpopulations in
Pseudomonas aeruginosa Biofilms; mBio; Vol. 8; No. 5; Art.
No. e01593-17; PMCID PMC5654934; 10.1128/mBio.01593-17
- Bergkessel, M.; Newman, D. K.; et el. (2017) SutA
is a Global Transcriptional Regulator Operating during Slow Growth in
Pseudomonas Aeruginosa; Pediatric Pulmonology; Vol. 52; No. S47;
S366-S367; 10.1002/ppul.23840
- Glasser, Nathaniel R.; Saunders, Scott H.; et el. (2017) The
Colorful World of Extracellular Electron Shuttles; Annual Review of
Microbiology; Vol. 71; 731-751; PMCID PMC5679407; 10.1146/annurev-micro-090816-093913
- Kasi, Ajay S.; Neubauer, Cajetan; et el. (2017) Bacterial
Growth Rate In Cystic Fibrosis Pulmonary Exacerbation; American
Journal of Respiratory and Critical Care Medicine; Vol. 195; Art.
No. A4856
- Glasser, Nathaniel R.; Wang, Benjamin X.; et el. (2017) The
pyruvate and α-ketoglutarate dehydrogenase complexes of Pseudomonas
aeruginosa catalyze pyocyanin and phenazine-1-carboxylic acid reduction
via the subunit dihydrolipoamide dehydrogenase; Journal of
Biological Chemistry; Vol. 292; No. 13; 5593-5607; PMCID PMC5392700; 10.1074/jbc.M116.772848
- Racki, Lisa R.; Tocheva, Elitza I.; et el. (2017) Polyphosphate
granule biogenesis is temporally and functionally tied to cell cycle
exit during starvation in Pseudomonas aeruginosa; Proceedings of the
National Academy of Sciences of the United States of America; Vol. 114;
No. 12; E2440-E2449; PMCID PMC5373386; 10.1073/pnas.1615575114
- Costa, Kyle C.; Glasser, Nathaniel R.; et el. (2017) Pyocyanin
degradation by a tautomerizing demethylase inhibits Pseudomonas
aeruginosa biofilms; Science; Vol. 355; No. 6321; 170-173; PMCID
PMC5303695; 10.1126/science.aag3180
- Ricci, J. N.; Morton, R.; et el. (2017) Hopanoids
play a role in stress tolerance and nutrient storage in the
cyanobacterium Nostoc punctiforme; Geobiology; Vol. 15; No. 1;
173-183; 10.1111/gbi.12204
- Newman, D. K. (2016) Primary
functions for “secondary” metabolites in microbial communities;
Molecular Biology of the Cell; Vol. 27; No. 25; S13; 10.1091/mbc.E16-10-0736
- Choi, Harry M. T.; Calvert, Colby R.; et el. (2016) Mapping
a multiplexed zoo of mRNA expression; Development; Vol. 143; No. 19;
3632-3637; PMCID PMC5087610; 10.1242/dev.140137
- Newman, Dianne (2016) Pathogen
Growth Rates in CF Sputum are Slow and Heterogeneous: Implications for
Research and Treatment Strategies; Pediatric Pulmonology; Vol. 51;
No. S45; 162; 10.1002/ppul.23575
- DePas, William H.; Starwalt-Lee, Ruth; et el. (2016) Exposing
the Three-Dimensional Biogeography and Metabolic States of Pathogens in
Cystic Fibrosis Sputum via Hydrogel Embedding, Clearing, and rRNA
Labeling; mBio; Vol. 7; No. 5; e00796-16; PMCID PMC5040109; 10.1128/mBio.00796-16
- Shikuma, Nicholas J.; Antoshechkin, Igor; et el. (2016) Stepwise
metamorphosis of the tubeworm Hydroides elegans is mediated by a
bacterial inducer and MAPK signaling; Proceedings of the National
Academy of Sciences of the United States of America; Vol. 113; No. 36;
10097-10102; PMCID PMC5018781; 10.1073/pnas.1603142113
- Bergkessel, Megan; Basta, David W.; et el. (2016) The
physiology of growth arrest: uniting molecular and environmental
microbiology; Nature Reviews Microbiology; Vol. 14; No. 9; 549-562;
PMCID PMC10069271; 10.1038/nrmicro.2016.107
- Newman, Dianne K.; Neubauer, Cajetan; et el. (2016) Cellular
and Molecular Biological Approaches to Interpreting Ancient
Biomarkers; Annual Review of Earth and Planetary Sciences; Vol. 44;
493-522; 10.1146/annurev-earth-050212-123958
- Babin, Brett M.; Bergkessel, Megan; et el. (2016) SutA
is a bacterial transcription factor expressed during slow growth in
Pseudomonas aeruginosa; Proceedings of the National Academy of
Sciences of the United States of America; Vol. 113; No. 5; E597-E605;
PMCID PMC4747698; 10.1073/pnas.1514412113
- Kopf, Sebastian H.; Sessions, Alex L.; et el. (2016) Trace
incorporation of heavy water reveals slow and heterogeneous pathogen
growth rates in cystic fibrosis sputum; Proceedings of the National
Academy of Sciences of the United States of America; Vol. 113; No. 2;
E110-E116; PMCID PMC4720290; 10.1073/pnas.1512057112
- Kreamer, Naomi N.; Phillips, Rob; et el. (2015) Predicting
the impact of promoter variability on regulatory outputs; Scientific
Reports; Vol. 5; Art. No. 18238; PMCID PMC4682146; 10.1038/srep18238
- Mariita, Richard M.; Bhatnagar, Srijak; et el. (2015) Complete
Genome Sequence of Curtobacterium sp. Strain MR_MD2014, Isolated from
Topsoil in Woods Hole, Massachusetts; Genome Announcements; Vol. 3;
No. 6; Art. No. e01504-15; PMCID PMC4698388; 10.1128/genomeA.01504-15
- Mariita, Richard M.; Bhatnagar, Srijak; et el. (2015) Complete
Genome Sequence of Streptomyces sp. Strain CCM_MD2014, Isolated from
Topsoil in Woods Hole, Massachusetts; Genome Announcements; Vol. 3;
No. 6; Art. No. e01506-15; PMCID PMC4698389; 10.1128/genomeA.01506-15
- Costa, Kyle C.; Bergkessel, Megan; et el. (2015) Enzymatic
Degradation of Phenazines Can Generate Energy and Protect Sensitive
Organisms from Toxicity; mBio; Vol. 6; No. 6; Art. No. e01520-15;
PMCID PMC4626857; 10.1128/mBio.01520-15
- Kulkarni, Gargi; Busset, Nicolas; et el. (2015) Specific
hopanoid classes differentially affect free-living and symbiotic states
of Bradyrhizobium diazoefficiens; mBio; Vol. 6; No. 5; e01251-15;
PMCID PMC4620461; 10.1128/mBio.01251-15
- Neubauer, C.; Dalleska, N. F.; et el. (2015) Lipid
remodeling in Rhodopseudomonas palustris TIE-1 upon loss of hopanoids
and hopanoid methylation; Geobiology; Vol. 13; No. 5; 443-453; 10.1111/gbi.12143
- Cowley, Elise S.; Kopf, Sebastian H.; et el. (2015) Pediatric
Cystic Fibrosis Sputum Can Be Chemically Dynamic, Anoxic, and Extremely
Reduced Due to Hydrogen Sulfide Formation; mBio; Vol. 6; No. 4; Art.
No. e00767; PMCID PMC4551978; 10.1128/mBio.00767-15
- Kopf, Sebastian H.; McGlynn, Shawn E.; et el. (2015) Heavy
water and ¹⁵N labeling with NanoSIMS analysis reveals growth-rate
dependent metabolic heterogeneity in chemostats; Environmental
Microbiology; Vol. 17; No. 7; 2542-2556; PMCID PMC4587896; 10.1111/1462-2920.12752
- Wu, C.-H.; Kong, L.; et el. (2015) Quantitative
hopanoid analysis enables robust pattern detection and comparison
between laboratories; Geobiology; Vol. 13; No. 4; 391-407; PMCID
PMC4676935; 10.1111/gbi.12132
- McCallin, Kyle; Cowley, Elise; et el. (2015) Sputum
Iron Levels During Cystic Fibrosis Pulmonary Exacerbation: A
Longitudinal Study; American Journal of Respiratory and Critical
Care Medicine; Vol. 191; Art. No. A3343
- Morgan, James J. and Newman, Dianne K. (2015) A
Conversation with James J. Morgan; Annual Review of Earth and
Planetary Sciences; Vol. 43; 1-27; 10.1146/annurev-earth-060614-105439
- Ricci, J. N.; Michel, A. J.; et el. (2015) Phylogenetic
analysis of HpnP reveals the origin of 2-methylhopanoid production in
Alphaproteobacteria; Geobiology; Vol. 13; No. 3; 267-277; 10.1111/gbi.12129
- Van Sambeek, Lindsey; Cowley, Elise S.; et el. (2015) Sputum
Glucose and Glycemic Control in Cystic Fibrosis-Related Diabetes: A
Cross-Sectional Study; PLoS ONE; Vol. 10; No. 3; Art. No. e0119938;
PMCID PMC4372582; 10.1371/journal.pone.0119938
- Kreamer, Naomi N.; Costa, Flavia; et el. (2015) The
Ferrous Iron-Responsive BqsRS Two-Component System Activates Genes That
Promote Cationic Stress Tolerance; mBio; Vol. 6; No. 2; Art.
No. e02549-14; PMCID PMC4358008; 10.1128/mBio.02549-14
- Wu, Chia-Hung; Bialecka-Fornal, Maja; et el. (2015) Methylation
at the C-2 position of hopanoids increases rigidity in native bacterial
membranes; eLife; Vol. 4; Art. No. e05663; PMCID PMC4337730; 10.7554/eLife.05663
- Silipo, Alba; Vitiello, Giuseppe; et el. (2014) Covalently
linked hopanoid-lipid A improves outer-membrane resistance of a
Bradyrhizobium symbiont of legumes; Nature Communications; Vol. 5;
No. 10; Art. No. 5106; 10.1038/ncomms6106
- Fox, Emily P.; Cowley, Elise S.; et el. (2014) Anaerobic
Bacteria Grow within Candida albicans Biofilms and Induce Biofilm
Formation in Suspension Cultures; Current Biology; Vol. 24; No. 20;
2411-2416; PMCID PMC4252622; 10.1016/j.cub.2014.08.057
- Malott, Rebecca J.; Wu, Chia-Hung; et el. (2014) Fosmidomycin
Decreases Membrane Hopanoids and Potentiates the Effects of Colistin on
Burkholderia multivorans Clinical Isolates; Antimicrobial Agents and
Chemotherapy; Vol. 58; No. 9; 5211-5219; PMCID PMC4135860; 10.1128/AAC.02705-14
- Glasser, Nathaniel R.; Kern, Suzanne E.; et el. (2014) Phenazine
redox cycling enhances anaerobic survival in Pseudomonas aeruginosa by
facilitating generation of ATP and a proton-motive force; Molecular
Microbiology; Vol. 92; No. 2; 399-412; PMCID PMC4046897; 10.1111/mmi.12566
- Ricci, Jessica N.; Coleman, Maureen L.; et el. (2014) Diverse
capacity for 2-methylhopanoid production correlates with a specific
ecological niche; ISME Journal; Vol. 8; No. 3; 675-684; PMCID
PMC3930323; 10.1038/ismej.2013.191
- Bird, Lina J.; Saralva, Ivo H.; et el. (2014) Nonredundant
Roles for Cytochrome c_2 and Two High-Potential Iron-Sulfur Proteins in
the Photoferrotroph Rhodopseudomonas palustris TIE-1; Journal of
Bacteriology; Vol. 196; No. 4; 850-858; PMCID PMC3911180; 10.1128/JB.00843-13
- Shikuma, Nicholas J.; Pilhofer, Martin; et el. (2014) Marine
Tubeworm Metamorphosis Induced by Arrays of Bacterial Phage Tail–Like
Structures; Science; Vol. 343; No. 6170; 529-533; PMCID PMC4949041;
10.1126/science.1246794
- Doughty, David M.; Dieterle, Michael; et el. (2014) Probing
the Subcellular Localization of Hopanoid Lipids in Bacteria Using
NanoSIMS; PLoS ONE; Vol. 9; No. 1; Art. No. e84455; PMCID
PMC3883690; 10.1371/journal.pone.0084455
- Olovnikov, Ivan; Chan, Ken; et el. (2013) Bacterial
Argonaute Samples the Transcriptome to Identify Foreign DNA;
Molecular Cell; Vol. 51; No. 5; 594-605; PMCID PMC3809076; 10.1016/j.molcel.2013.08.014
- Hunter, Ryan C.; Asfour, Fadi; et el. (2013) Ferrous
Iron Is a Significant Component of Bioavailable Iron in Cystic Fibrosis
Airways; mBio; Vol. 4; No. 4; Art. No. e00557-13; PMCID PMC3753050;
10.1128/mBio.00557-13
- Bird, Lina J.; Coleman, Maureen L.; et el. (2013) Iron
and Copper Act Synergistically To Delay Anaerobic Growth of
Bacteria; Applied and Environmental Microbiology; Vol. 79; No. 12;
3619-3627; PMCID PMC3675935; 10.1128/AEM.03944-12
- Kulkarni, Gargi; Wu, Chia-Hung; et el. (2013) The
General Stress Response Factor EcfG Regulates Expression of the C-2
Hopanoid Methylase HpnP in Rhodopseudomonas palustris TIE-1; Journal
of Bacteriology; Vol. 195; No. 11; 2490-2498; PMCID PMC3676068; 10.1128/JB.00186-13
- Dietrich, Lars E. P.; Okegbe, Chinweike; et el. (2013) Bacterial
Community Morphogenesis Is Intimately Linked to the Intracellular Redox
State; Journal of Bacteriology; Vol. 195; No. 7; 1371-1380; PMCID
PMC3624522; 10.1128/JB.02273-12
- Kopf, Sebastian H.; Henny, Cynthia; et el. (2013) Ligand-Enhanced
Abiotic Iron Oxidation and the Effects of Chemical versus Biological
Iron Cycling in Anoxic Environments; Environmental Science and
Technology; Vol. 47; No. 6; 2602-2611; PMCID PMC3604861; 10.1021/es3049459
- Sessions, Alex L.; Zhang, Lichun; et el. (2013) Identification
and quantification of polyfunctionalized hopanoids by high temperature
gas chromatography–mass spectrometry; Organic Geochemistry; Vol. 56;
120-130; PMCID PMC3780965; 10.1016/j.orggeochem.2012.12.009
- Pereira, L.; Saraiva, I. H.; et el. (2012) Crystallization
and preliminary crystallographic studies of FoxE from Rhodobacter
ferrooxidans SW2, an FeII oxidoreductase involved in
photoferrotrophy; Acta Crystallographica. Section F, Structural
Biology and Crystallization Communications; Vol. 68; No. 9; 1106-1108;
PMCID PMC3433209; 10.1107/S174430911203271X
- Saraiva, Ivo H.; Newman, Dianne K.; et el. (2012) Functional
Characterization of the FoxE Iron Oxidoreductase from the
Photoferrotroph Rhodobacter ferrooxidans SW2; Journal of Biological
Chemistry; Vol. 287; No. 30; 25541-25548; PMCID PMC3408196; 10.1074/jbc.M112.360636
- Kopf, S. H. and Newman, D. K. (2012) Photomixotrophic
growth of Rhodobacter capsulatus SB1003 on ferrous iron; Geobiology;
Vol. 10; No. 3; 216-222; PMCID PMC4587904; 10.1111/j.1472-4669.2011.00313.x
- Kreamer, Naomi N. K.; Wilks, Jessica C.; et el. (2012) BqsR/BqsS
Constitute a Two-Component System That Senses Extracellular Fe(II) in
Pseudomonas aeruginosa; Journal of Bacteriology; Vol. 194; No. 5;
1195-1204; PMCID PMC3294787; 10.1128/JB.05634-11
- Welander, P. V.; Doughty, D. M.; et el. (2012) Identification
and characterization of Rhodopseudomonas palustris TIE-1 hopanoid
biosynthesis mutants; Geobiology; Vol. 10; No. 2; 163-177; PMCID
PMC3553210; 10.1111/j.1472-4669.2011.00314.x
- Doughty, David M.; Coleman, Maureen L.; et el. (2011) The
RND-family transporter, HpnN, is required for hopanoid localization to
the outer membrane of Rhodopseudomonas palustris TIE-1; Proceedings
of the National Academy of Sciences of the United States of America;
Vol. 108; No. 45; E1045-E1051; PMCID PMC3215060; 10.1073/pnas.1104209108
- Sullivan, Nora L.; Tzeranis, Dimitrios S.; et el. (2011) Quantifying
the Dynamics of Bacterial Secondary Metabolites by Spectral Multiphoton
Microscopy; ACS Chemical Biology; Vol. 6; No. 9; 893-899; PMCID
PMC3212935; 10.1021/cb200094w
- Waldbauer, Jacob R.; Newman, Dianne K.; et el. (2011) Microaerobic
steroid biosynthesis and the molecular fossil record of Archean
life; Proceedings of the National Academy of Sciences of the United
States of America; Vol. 108; No. 33; 13409-13414; PMCID PMC3158215; 10.1073/pnas.1104160108
- Reddy, Kirthi C.; Hunter, Ryan C.; et el. (2011) Caenorhabditis
elegans NPR-1–mediated behaviors are suppressed in the presence of
mucoid bacteria; Proceedings of the National Academy of Sciences of
the United States of America; Vol. 108; No. 31; 12887-12892; PMCID
PMC3150904; 10.1073/pnas.1108265108
- Bird, Lina J.; Bonnefoy, Violaine; et el. (2011) Bioenergetic
challenges of microbial iron metabolisms; Trends in Microbiology;
Vol. 19; No. 7; 330-340; 10.1016/j.tim.2011.05.001
- Wang, Yun; Wilks, Jessica C.; et el. (2011) Phenazine-1-Carboxylic
Acid Promotes Bacterial Biofilm Development via Ferrous Iron
Acquisition; Journal of Bacteriology; Vol. 193; No. 14; 3606-3617;
PMCID PMC3133341; 10.1128/JB.00396-11
- Newman, Dianne K. and Coleman, Maureen L. (2011) Where
reductionism meets complexity: a call for growth in the study of
non-growth; Environmental Microbiology Reports; Vol. 3; No. 1;
14-15; 10.1111/j.1758-2229.2010.00236.x
- Bose, Arpita and Newman, Dianne K. (2011) Regulation
of the phototrophic iron oxidation (pio) genes in Rhodopseudomonas
palustris TIE-1 is mediated by the global regulator, FixK; Molecular
Microbiology; Vol. 79; No. 1; 63-75; 10.1111/j.1365-2958.2010.07430.x
- Hunter, Ryan C. and Newman, Dianne K. (2010) A
Putative ABC Transporter, HatABCDE, Is among Molecular Determinants of
Pyomelanin Production in Pseudomonas aeruginosa; Journal of
Bacteriology; Vol. 192; No. 22; 5962-5971; PMCID PMC2976449; 10.1128/JB.01021-10
- Kappler, A.; Johnson, C. M.; et el. (2010) Evidence
for equilibrium iron isotope fractionation by nitrate-reducing
iron(II)-oxidizing bacteria; Geochimica et Cosmochimica Acta; Vol.
74; No. 10; 2826-2842; PMCID PMC2873596; 10.1016/j.gca.2010.02.017
- Welander, Paula V.; Coleman, Maureen L.; et el. (2010) Identification
of a methylase required for 2-methylhopanoid production and implications
for the interpretation of sedimentary hopanes; Proceedings of the
National Academy of Sciences of the United States of America; Vol. 107;
No. 19; 8537-8542; PMCID PMC2889317; 10.1073/pnas.0912949107
- Ramos, Itzel; Dietrich, Lars E. P.; et el. (2010) Phenazines
affect biofilm formation by Pseudomonas aeruginosa in similar ways at
various scales; Research in Microbiology; Vol. 161; No. 3; 187-191;
PMCID PMC2886020; 10.1016/j.resmic.2010.01.003
- Newman, Dianne K. (2010) Feasting
on Minerals; Science; Vol. 327; No. 5967; 793-794; 10.1126/science.1184229
- Wang, Yun; Kern, Suzanne E.; et el. (2010) Endogenous
Phenazine Antibiotics Promote Anaerobic Survival of Pseudomonas
aeruginosa via Extracellular Electron Transfer; Journal of
Bacteriology; Vol. 192; No. 1; 365-369; PMCID PMC2798253; 10.1128/JB.01188-09
- Doughty, D. M.; Hunter, R. C.; et el. (2009) 2-Methylhopanoids
are maximally produced in akinetes of Nostoc punctiforme: geobiological
implications; Geobiology; Vol. 7; No. 5; 524-532; PMCID PMC2860729;
10.1111/j.1472-4669.2009.00217.x
- Poulain, Alexandre J. and Newman, Dianne K. (2009) Rhodobacter
capsulatus Catalyzes Light-Dependent Fe(II) Oxidation under Anaerobic
Conditions as a Potential Detoxification Mechanism; Applied and
Environmental Microbiology; Vol. 75; No. 21; 6639-6646; PMCID
PMC2772431; 10.1128/AEM.00054-09
- Welander, Paula V.; Hunter, Ryan C.; et el. (2009) Hopanoids
Play a Role in Membrane Integrity and pH Homeostasis in Rhodopseudomonas
palustris TIE-1; Journal of Bacteriology; Vol. 191; No. 19;
6145-6156; PMCID PMC2747905; 10.1128/JB.00460-09
- Boal, Amie K.; Genereux, Joseph C.; et el. (2009) Redox
signaling between DNA repair proteins for efficient lesion
detection; Proceedings of the National Academy of Sciences of the
United States of America; Vol. 106; No. 36; 15237-15242; PMCID
PMC2741234; 10.1073/pnas.0908059106
- Sessions, Alex L.; Doughty, David M.; et el. (2009) The
Continuing Puzzle of the Great Oxidation Event; Current Biology;
Vol. 19; No. 14; R567-R574; 10.1016/j.cub.2009.05.054
- Newman, Dianne K. (2009) From
Iron Oxides to Infections; ChemSusChem; Vol. 2; No. 5; 380-382; 10.1002/cssc.200900038
- Croal, L. R.; Jiao, Y.; et el. (2009) Phototrophic
Fe(II) oxidation in an atmosphere of H_2: implications for Archean
banded iron formations; Geobiology; Vol. 7; No. 1; 21-24; PMCID
PMC2763526; 10.1111/j.1472-4669.2008.00185.x
- Dietrich, Lars E. P.; Teal, Tracy K.; et el. (2008) Redox-Active
Antibiotics Control Gene Expression and Community Behavior in Divergent
Bacteria; Science; Vol. 321; No. 5893; 1203-1206; PMCID PMC2745639;
10.1126/science.1160619
- Newman, D. K. (2008) From
iron oxides to infections; Geobiology; Vol. 6; No. 3; 196-200; PMCID
PMC2804855; 10.1111/j.1472-4669.2008.00155.x
- Wang, Yun and Newman, Dianne K. (2008) Redox
Reactions of Phenazine Antibiotics with Ferric (Hydr)oxides and
Molecular Oxygen; Environmental Science and Technology; Vol. 42;
No. 7; 2380-2386; PMCID PMC2778262; 10.1021/es702290a
- Gorodetsky, Alon A.; Dietrich, Lars E. P.; et el. (2008) DNA binding
shifts the redox potential of the transcription factor SoxR;
Proceedings of the National Academy of Sciences of the United States of
America; Vol. 105; No. 10; 3684-3689; PMCID PMC2268809; 10.1073/pnas.0800093105
- Malasarn, Davin; Keeffe, Jennifer R.; et el. (2008) Characterization
of the Arsenate Respiratory Reductase from Shewanella sp. Strain
ANA-3; Journal of Bacteriology; Vol. 190; No. 1; 135-142; PMCID
PMC2223751; 10.1128/JB.01110-07
- Caiazza, Nicky C.; Lies, Douglas P.; et el. (2007) Phototrophic
Fe(II) Oxidation Promotes Organic Carbon Acquisition by Rhodobacter
capsulatus SB1003; Applied and Environmental Microbiology; Vol. 73;
No. 19; 6150-6158; PMCID PMC2074999; 10.1128/AEM.02830-06
- Rashby, Sky E.; Sessions, Alex L.; et el. (2007) Biosynthesis
of 2-methylbacteriohopanepolyols by an anoxygenic phototroph;
Proceedings of the National Academy of Sciences of the United States of
America; Vol. 104; No. 38; 15099-15014; PMCID PMC1986619; 10.1073/pnas.0704912104
- Price-Whelan, Alexa; Dietrich, Lars E. P.; et el. (2007) Pyocyanin
Alters Redox Homeostasis and Carbon Flux through Central Metabolic
Pathways in Pseudomonas aeruginosa PA14; Journal of Bacteriology;
Vol. 189; No. 17; 6372-6381; PMCID PMC1951912; 10.1128/JB.00505-07
- Gralnick, Jeffrey A. and Newman, Dianne K. (2007) Extracellular
respiration; Molecular Microbiology; Vol. 65; No. 1; 1-11; PMCID
PMC2804852; 10.1111/j.1365-2958.2007.05778.x
- Bosak, T.; Greene, S. E.; et el. (2007) A
likely role for anoxygenic photosynthetic microbes in the formation of
ancient stromatolites; Geobiology; Vol. 5; No. 2; 119-126; PMCID
PMC2947360; 10.1111/j.1472-4669.2007.00104.x
- Croal, Laura R.; Jiao, Yongqin; et el. (2007) The fox
Operon from Rhodobacter Strain SW2 Promotes Phototrophic Fe(II)
Oxidation in Rhodobacter capsulatus SB1003; Journal of Bacteriology;
Vol. 189; No. 5; 1774-1782; PMCID PMC1855712; 10.1128/JB.01395-06
- Jiao, Yongqin and Newman, Dianne K. (2007) The pio
Operon Is Essential for Phototrophic Fe(II) Oxidation in
Rhodopseudomonas palustris TIE-1; Journal of Bacteriology; Vol. 189;
No. 5; 1765-1773; PMCID PMC1855732; 10.1128/JB.00776-06
- Teal, Tracy K.; Lies, Douglas P.; et el. (2006) Spatiometabolic
Stratification of Shewanella oneidensis Biofilms; Applied and
Environmental Microbiology; Vol. 72; No. 11; 7324-7330; PMCID
PMC1636161; 10.1128/AEM.01163-06
- Campbell, Kate M.; Malasarn, Davin; et el. (2006) Simultaneous
Microbial Reduction of Iron(III) and Arsenic(V) in Suspensions of
Hydrous Ferric Oxide; Environmental Science and Technology; Vol. 40;
No. 19; 5950-5955; 10.1021/es0600476
- Dietrich, Lars E. P.; Price-Whelan, Alexa; et el. (2006) The phenazine
pyocyanin is a terminal signalling factor in the quorum sensing network
of Pseudomonas aeruginosa; Molecular Microbiology; Vol. 61; No. 5;
1308-1321; 10.1111/j.1365-2958.2006.05306.x
- Dietrich, Lars E. P.; Tice, Michael M.; et el. (2006) The
co-evolution of life and Earth; Current Biology; Vol. 16; No. 11;
R395-R400; 10.1016/j.cub.2006.05.017
- Gralnick, Jeffrey A.; Vali, Hojatollah; et el. (2006) Extracellular
respiration of dimethyl sulfoxide by Shewanella oneidensis strain
MR-1; Proceedings of the National Academy of Sciences of the United
States of America; Vol. 103; No. 12; 4669-4674; PMCID PMC1450229; 10.1073/pnas.0505959103
- Price-Whelan, Alexa; Dietrich, Lars E. P.; et el. (2006) Rethinking
‘secondary’ metabolism: physiological roles for phenazine
antibiotics; Nature Chemical Biology; Vol. 2; No. 2; 71-78; 10.1038/nchembio764
- Komeili, Arash; Li, Zhou; et el. (2006) Magnetosomes
Are Cell Membrane Invaginations Organized by the Actin-Like Protein
MamK; Science; Vol. 311; No. 5758; 242-245; 10.1126/science.1123231
- Salmassi, Tina M.; Walker, Jeffrey J.; et el. (2006) Community
and cultivation analysis of arsenite oxidizing biofilms at Hot
Creek; Environmental Microbiology; Vol. 8; No. 1; 50-59; 10.1111/j.1462-2920.2005.00862.x
- Lee, Anthea K.; Buehler, Martin G.; et el. (2006) Influence
of a dual-species biofilm on the corrosion of mild steel; Corrosion
Science; Vol. 48; No. 1; 165-178; 10.1016/j.corsci.2004.11.013
- Newman, Dianne K. (2006) Bacteria
Are Beautiful; Engineering and Science; Vol. 69; No. 2; 8-15
- Kappler, Andreas; Pasquero, Claudia; et el. (2005) Deposition
of banded iron formations by anoxygenic phototrophic Fe(II)-oxidizing
bacteria; Geology; Vol. 33; No. 11; 865-868; 10.1130/G21658.1
- Saltikov, Chad W.; Wildman, Richard A., Jr.; et el. (2005) Expression
Dynamics of Arsenic Respiration and Detoxification in Shewanella sp.
Strain ANA-3; Journal of Bacteriology; Vol. 187; No. 21; 7390-7396;
PMCID PMC1272973; 10.1128/JB.187.21.7390-7396.2005
- Kappler, A.; Schink, B.; et el. (2005) Fe(III)
mineral formation and cell encrustation by the nitrate-dependent
Fe(II)-oxidizer strain BoFeN1; Geobiology; Vol. 3; No. 4; 235-245;
10.1111/j.1472-4669.2006.00056.x
- Jiao, Yongqin; Kappler, Andreas; et el. (2005) Isolation
and Characterization of a Genetically Tractable Photoautotrophic
Fe(II)-Oxidizing Bacterium, Rhodopseudomonas palustris Strain TIE-1;
Applied and Environmental Microbiology; Vol. 71; No. 8; 4487-4496; PMCID
PMC1183355; 10.1128/AEM.71.8.4487-4496.2005
- Lies, Douglas P.; Hernandez, Maria E.; et el. (2005) Shewanella
oneidensis MR-1 Uses Overlapping Pathways for Iron Reduction at a
Distance and by Direct Contact under Conditions Relevant for
Biofilms; Applied and Environmental Microbiology; Vol. 71; No. 8;
4414-4426; PMCID PMC1183279; 10.1128/AEM.71.8.4414-4426.2005
- Konhauser, K. O.; Newman, D. K.; et el. (2005) The
potential significance of microbial Fe(III) reduction during deposition
of Precambrian banded iron formations; Geobiology; Vol. 3; No. 3;
167-177; 10.1111/j.1472-4669.2005.00055.x
- Gralnick, Jeffrey A.; Brown, C. Titus; et el. (2005) Anaerobic
regulation by an atypical Arc system in Shewanella oneidensis;
Molecular Microbiology; Vol. 56; No. 5; 1347-1357; 10.1111/j.1365-2958.2005.04628.x
- Bosak, Tanja and Newman, Dianne K. (2005) Microbial
Kinetic Controls on Calcite Morphology in Supersaturated Solutions;
Journal of Sedimentary Research; Vol. 75; No. 2; 190-199; 10.2110/jsr.2005.015
- Croal, Laura R.; Gralnick, Jeffrey A.; et el. (2004) The genetics
of geochemistry; Annual Review of Genetics; Vol. 38; 175-202; 10.1146/annurev.genet.38.072902.091138
- Malasarn, D.; Saltikov, C. W.; et el. (2004) arrA
Is a Reliable Marker for As(V) Respiration; Science; Vol. 306;
No. 5695; 455-455; 10.1126/science.1102374
- Bosak, Tanja; Souza-Egipsy, Virginia; et el. (2004) Micrometer-scale
porosity as a biosignature in carbonate crusts; Geology; Vol. 32;
No. 9; 781-784; 10.1130/G20681.1
- Bosak, T.; Souza-Egipsy, V.; et el. (2004) A
laboratory model of abiotic peloid formation; Geobiology; Vol. 2;
No. 3; 189-198; 10.1111/j.1472-4677.2004.00031.x
- Komeili, Arash; Vali, Hojatollah; et el. (2004) Magnetosome
vesicles are present before magnetite formation, and MamA is required
for their activation; Proceedings of the National Academy of
Sciences of the United States of America; Vol. 101; No. 11; 3839-3844;
PMCID PMC374331; 10.1073/pnas.0400391101
- Croal, Laura R.; Johnson, Clark M.; et el. (2004) Iron
isotope fractionation by Fe(II)-oxidizing photoautotrophic bacteria;
Geochimica et Cosmochimica Acta; Vol. 68; No. 6; 1227-1242; 10.1016/j.gca.2003.09.011
- Kappler, Andreas and Newman, Dianne K. (2004) Formation
of Fe(III)-minerals by Fe(II)-oxidizing photoautotrophic bacteria;
Geochimica et Cosmochimica Acta; Vol. 68; No. 6; 1217-1226; 10.1016/j.gca.2003.09.006
- Hernandez, Maria E.; Kappler, Andreas; et el. (2004) Phenazines
and Other Redox-Active Antibiotics Promote Microbial Mineral
Reduction; Applied and Environmental Microbiology; Vol. 70; No. 2;
921-928; PMCID PMC348881; 10.1128/AEM.70.2.921-928.2004
- Saltikov, Chad W. and Newman, Dianne K. (2003) Genetic
identification of a respiratory arsenate reductase; Proceedings of
the National Academy of Sciences of the United States of America; Vol.
100; No. 19; 10983-10988; PMCID PMC196913; 10.1073/pnas.1834303100
- Lee, A. K. and Newman, D. K. (2003) Microbial
iron respiration: impacts on corrosion processes; Applied
Microbiology and Biotechnology; Vol. 62; No. 2-3; 134-139; 10.1007/s00253-003-1314-7
- Bosak, Tanja and Newman, Dianne K. (2003) Microbial
nucleation of calcium carbonate in the Precambrian; Geology; Vol.
31; No. 7; 577-580; 10.1130/0091-7613(2003)031<0577:MNOCCI>2.0.CO;2
- Saltikov, Chad W.; Cifuentes, Ana; et el. (2003) The ars
Detoxification System Is Advantageous but Not Required for As(V)
Respiration by the Genetically Tractable Shewanella Species Strain
ANA-3; Applied and Environmental Microbiology; Vol. 69; No. 5;
2800-2809; PMCID PMC154534; 10.1128/AEM.69.5.2800-2809.2003
- Newman, Dianne K. and Banfield, Jillian F. (2002) Geomicrobiology:
How Molecular-Scale Interactions Underpin Biogeochemical Systems;
Science; Vol. 296; No. 5570; 1071-1077; 10.1126/science.1010716
- Dubiel, M.; Hsu, C. H.; et el. (2002) Microbial
Iron Respiration Can Protect Steel from Corrosion; Applied and
Environmental Microbiology; Vol. 68; No. 3; 1440-1445; PMCID PMC123774;
10.1128/AEM.68.3.1440-1445.2002
- Shyu, J. Bruce H.; Lies, Douglas P.; et el. (2002) Protective
Role of tolC in Efflux of the Electron Shuttle
Anthraquinone-2,6-Disulfonate; Journal of Bacteriology; Vol. 184;
No. 6; 1806-1810; PMCID PMC134904; 10.1128/JB.184.6.1806-1810.2002
- Salmassi, Tina M.; Venkateswaren, Kasthuri; et el. (2002) Oxidation
of Arsenite by Agrobacterium albertimagni, AOL15, sp. nov., Isolated
from Hot Creek, California; Geomicrobiology Journal; Vol. 19; No. 1;
53-66; 10.1080/014904502317246165
- Hernandez, M. E. and Newman, D. K. (2001) Extracellular
electron transfer; Cellular and Molecular Life Sciences; Vol. 58;
No. 11; 1562-1571; 10.1007/PL00000796
- Newman, Dianne K. (2001) How
Bacteria Respire Minerals; Science; Vol. 292; No. 5520; 1312-1313;
10.1126/science.1060572
- Newman, Dianne K. and Kolter, Roberto (2000) A
role for excreted quinones in extracellular electron transfer;
Nature; Vol. 405; No. 6782; 94-97; 10.1038/35011098
- Newman, Dianne K.; Ahmann, Dianne; et el. (1998) A
brief review of microbial arsenate respiration; Geomicrobiology
Journal; Vol. 15; No. 4; 255-268; 10.1080/01490459809378082
- Newman, Dianne K.; Kennedy, Erin K.; et el. (1997) Dissimilatory
arsenate and sulfate reduction in Desulfotomaculum auripigmentum sp.
nov.; Archives of Microbiology; Vol. 168; No. 5; 380-388; 10.1007/s002030050512
- Newman, Dianne K.; Beveridge, Terry J.; et el. (1997) Precipitation
of Arsenic Trisulfide by Desulfotomaculum auripigmentum; Applied and
Environmental Microbiology; Vol. 63; No. 5; 2022-2028