Hucka, Michael

Article from CaltechAUTHORS

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• Neal, Maxwell Lewis and Hucka, Michael (2019) Harmonizing semantic annotations for computational models in biology; Briefings in Bioinformatics; Vol. 20; No. 2; 540-550; 10.1093/bib/bby087
• Hucka, M. and Graham, M. J. (2018) Software search is not a science, even among scientists: A survey of how scientists and engineers find software; Journal of Systems and Software; Vol. 141; 171-191; 10.1016/j.jss.2018.03.047
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• Hucka, Michael and Bergmann, Frank T., et el. (2018) The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 2 Core; Journal of Integrative Bioinformatics; Vol. 15; No. 1; Art. No. 20170081; PMCID PMC6167032; 10.1515/jib-2017-0081
• Hucka, Michael (2017) SBMLPkgSpec: a LaTeX style file for SBML package specification documents; BMC Research Notes; Vol. 10; Art. No. 451; PMCID PMC5588604; 10.1186/s13104-017-2788-1
• Hucka, Michael and Smith, Lucian P. (2016) SBML Level 3 package: Groups, Version 1 Release 1; Journal of Integrative Bioinformatics; Vol. 13; No. 3; Art. No. 290; 10.2390/biecoll-jib-2016-290
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• Gómez, Harold F. and Hucka, Michael, et el. (2016) MOCCASIN: converting MATLAB ODE models to SBML; Bioinformatics; Vol. 32; No. 12; 1905-1906; PMCID PMC4908318; 10.1093/bioinformatics/btw056
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• Ebrahim, Ali and Hucka, Michael (2015) Do genome-scale models need exact solvers or clearer standards?; Molecular Systems Biology; Vol. 11; No. 10; Art. No. 831; PMCID PMC4631202; 10.15252/msb.20156157
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• Thiele, Ines and Hucka, Michael (2013) A community-driven global reconstruction of human metabolism; Nature Biotechnology; Vol. 31; No. 5; 419-425; PMCID PMC3856361; 10.1038/nbt.2488
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• Courtot, Mélanie and Hucka, Michael (2011) Controlled vocabularies and semantics in systems biology; Molecular Systems Biology; Vol. 7; Art. No. 543; PMCID PMC3261705; 10.1038/msb.2011.77
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• Waltemath, Dagmar and Hucka, Michael (2011) Minimum Information About a Simulation Experiment (MIASE); PLoS Computational Biology; Vol. 7; No. 4; Art. No. e1001122; PMCID PMC3084216; 10.1371/journal.pcbi.1001122
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• Demir, Emek and Hucka, Michael (2010) The BioPAX community standard for pathway data sharing; Nature Biotechnology; Vol. 28; No. 9; 935-942; PMCID PMC3001121; 10.1038/nbt.1666
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• Hucka, Michael and Le Novère, Nicolas (2010) Software that goes with the flow in systems biology; BMC Biology; Vol. 8; 140-142; PMCID PMC2993668; 10.1186/1741-7007-8-140
• Le Novère, Nicolas and Hucka, Michael, et el. (2009) The Systems Biology Graphical Notation; Nature Biotechnology; Vol. 27; No. 8; 735-741; 10.1038/nbt.1558
• Dräger, Andreas and Planatscher, Hannes, et el. (2009) SBML2LATEX: Conversion of SBML files into human-readable reports; Bioinformatics; Vol. 25; No. 11; 1455-1456; PMCID PMC2682517; 10.1093/bioinformatics/btp170
• Hucka, Michael (2009) An overview of several standardization efforts for systems biology; Journal of Physiological Sciences; Vol. 59; No. S1; 102-102
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• Hucka, Michael and Keating, Sarah (2007) A tutorial about SBML and SBML Level 2 Version 2; Nature Precedings; 10.1038/npre.2007.19.1
• Hucka, Michael (2007) SBML, BioModels.net, and SBGN; Nature Precedings; 10.1038/npre.2007.20.1
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• Sauro, Herbert M. and Hucka, Michael, et el. (2003) Next Generation Simulation Tools: The Systems Biology Workbench and BioSPICE Integration; OMICS: A Journal of Integrative Biology; Vol. 7; No. 4; 355-372; 10.1089/153623103322637670
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