Adami, Christoph Carl

Article from CaltechAUTHORS

• Patra, Biranchi and Kon, Yoshiko, el al. (2017) A genome wide dosage suppressor network reveals genomic robustness; Nucleic Acids Research; Vol. 45; No. 1; 255-270; PMCID PMC5224485; 10.1093/nar/gkw1148
• Østman, Bjørn and Lin, Randall, el al. (2014) Trade-offs drive resource specialization and the gradual establishment of ecotypes; BMC Evolutionary Biology; Vol. 14; Art. No. 113; PMCID PMC4067365; 10.1186/1471-2148-14-113
• Dorn, Evan D. and Adami, Christoph (2011) Robust Monomer-Distribution Biosignatures in Evolving Digital Biota; Astrobiology; Vol. 11; No. 10; 959-968; 10.1089/ast.2010.0556
• Edlund, Jeffrey A. and Chaumont, Nicolas, el al. (2011) Integrated Information Increases with Fitness in the Evolution of Animats; PLoS Computational Biology; Vol. 7; No. 10; Art. No. e1002236; PMCID PMC3197648; 10.1371/journal.pcbi.1002236
• Qian, Jifeng and Hintze, Arend, el al. (2011) Colored Motifs Reveal Computational Building Blocks in the C. elegans Brain; PLoS ONE; Vol. 6; No. 3; Art. No. e17013; PMCID PMC3049772; 10.1371/journal.pone.0017013
• Dorn, Evan D. and Nealson, Kenneth H., el al. (2011) Monomer Abundance Distribution Patterns as a Universal Biosignature: Examples from Terrestrial and Digital Life; Journal of Molecular Evolution; Vol. 72; No. 3; 283-295; 10.1007/s00239-011-9429-4
• Adami, Christoph (2006) Digital genetics: unravelling the genetic basis of evolution; Nature Reviews. Genetics; Vol. 7; No. 2; 109-118; 10.1038/nrg1771
• Drummond, D. Allan and Bloom, Jesse D., el al. (2005) Why highly expressed proteins evolve slowly; Proceedings of the National Academy of Sciences of the United States of America; Vol. 102; No. 40; 14338-14343; PMCID PMC1242296; 10.1073/pnas.0504070102
• Mitchell, David R. and Adami, Christoph, el al. (2005) Random matrix model of adiabatic quantum computing; Physical Review A; Vol. 71; No. 5; Art. No. 052324; 10.1103/PhysRevA.71.052324
• Bloom, Jesse D. and Silberg, Jonathan J., el al. (2005) Thermodynamic prediction of protein neutrality; Proceedings of the National Academy of Sciences of the United States of America; Vol. 102; No. 3; 606-611; PMCID PMC545518; 10.1073/pnas.0406744102
• Chow, Stephanie S. and Wilke, Claus O., el al. (2004) Adaptive Radiation from Resource Competition in Digital Organisms; Science; Vol. 305; No. 5680; 84-86; 10.1126/science.1096307
• Bloom, Jesse D. and Adami, Christoph (2004) Evolutionary rate depends on number of protein-protein interactions independently of gene expression level: Response; BMC Evolutionary Biology; Vol. 4; Art. No. 14; PMCID PMC443507; 10.1186/1471-2148-4-14
• Bloom, Jesse D. and Wilke, Claus O., el al. (2004) Stability and the Evolvability of Function in a Model Protein; Biophysical Journal; Vol. 86; No. 5; 2758-2764; PMCID PMC1304146; 10.1016/S0006-3495(04)74329-5
• Edlund, Jeffrey A. and Adami, Christoph (2004) Evolution of robustness in digital organisms; Artificial Life; Vol. 10; No. 2; 167-179; 10.1162/106454604773563595
• White, Justin S. and Adami, Christoph (2004) Bifurcation into functional niches in adaptation; Artificial Life; Vol. 10; No. 2; 135-144; 10.1162/106454604773563568
• Wagenaar, Daniel A. and Adami, Christoph (2004) Influence of chance, history, and adaptation on digital evolution; Artificial Life; Vol. 10; No. 2; 181-190; 10.1162/106454604773563603
• Adami, Christoph and Wilke, Claus O. (2004) Experiments in Digital Evolution (Editors' Introduction to the Special Issue); Artificial Life; Vol. 10; No. 2; 117-122; 10.1162/106454604773563540
• Bloom, Jesse D. and Adami, Christoph (2003) Apparent dependence of protein evolutionary rate on number of interactions is linked to biases in protein–protein interactions data sets; BMC Evolutionary Biology; Vol. 3; Art. No. 21; PMCID PMC270031; 10.1186/1471-2148-3-21
• Lenski, Richard E. and Ofria, Charles, el al. (2003) The evolutionary origin of complex features; Nature; Vol. 423; No. 6936; 139-144; 10.1038/nature01568
• Wilke, Claus O. and Lenski, Richard E., el al. (2003) Compensatory mutations cause excess of antagonistic epistasis in RNA secondary structure folding; BMC Evolutionary Biology; Vol. 3; Art. No. 3; PMCID PMC149451; 10.1186/1471-2148-3-3
• Adami, Christoph and Chu, Johan (2002) Critical and near-critical branching processes; Physical Review E; Vol. 66; No. 1; Art. No. 011907; 10.1103/PhysRevE.66.011907
• Wilke, Claus O. and Christoph, Adami (2001) Interaction between directional epistasis and average mutational effects; Proceedings of the Royal Society of London. Series B, Biological Sciences; Vol. 268; No. 1475; 1469-1474; PMCID PMC1088765; 10.1098/rspb.2001.1690
• Wilke, Claus O. and Wang, Jia Lan, el al. (2001) Evolution of digital organisms at high mutation rates leads to survival of the flattest; Nature; Vol. 412; No. 6844; 331-333; 10.1038/35085569
• Bedau, Mark A. and McCaskill, John S., el al. (2000) Open problems in artificial life; Artificial Life; Vol. 6; No. 4; 363-376; 10.1162/106454600300103683
• Adami, Christoph and Ofria, Charles, el al. (2000) Evolution of biological complexity; Proceedings of the National Academy of Sciences of the United States of America; Vol. 97; No. 9; 4463-4468; PMCID PMC18257; 10.1073/pnas.97.9.4463
• Astor, J. C. and Adami, C. (2000) A Developmental Model for the Evolution of Artificial Neural Networks; Artificial Life; Vol. 6; No. 3; 189-218; 10.1162/106454600568834
• Chu, Johan and Adami, Christoph (1999) A simple explanation for taxon abundance patterns; Proceedings of the National Academy of Sciences of the United States of America; Vol. 96; No. 26; 15017-15019; PMCID PMC24765; 10.1073/pnas.96.26.15017
• Lenski, Richard E. and Ofria, Charles, el al. (1999) Genome complexity, robustness and genetic interactions in digital organisms; Nature; Vol. 400; No. 6745; 661-664; 10.1038/23245
• Cerf, N. J. and Adami, C. (1999) Quantum extension of conditional probability; Physical Review A; Vol. 60; No. 2; 893-897; 10.1103/PhysRevA.60.893
• Cerf, N. J. and Adami, C., el al. (1999) Reduction criterion for separability; Physical Review A; Vol. 60; No. 2; 898-909; 10.1103/PhysRevA.60.898
• Cerf, N. J. and Adami, C., el al. (1998) Optical simulation of quantum logic; Physical Review A; Vol. 57; No. 3; R1477-R1480; 10.1103/PhysRevA.57.R1477
• Cerf, N. J. and Adami, C. (1997) Negative Entropy and Information in Quantum Mechanics; Physical Review Letters; Vol. 79; No. 26; 5194-5197; 10.1103/PhysRevLett.79.5194
• Cerf, N. J. and Adami, C. (1997) Entropic Bell inequalities; Physical Review A; Vol. 55; No. 5; 3371-3374; 10.1103/PhysRevA.55.3371
• Adami, Chris (1996) Book Review: Modeling Nature with Cellular Automata using Mathenmtica by Richard Gaylord and Kazume Nishidate; ACM SIGSAM Bulletin; Vol. 30; No. 3; 24-25; 10.1145/240065.570110